| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1588 |
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| Symbol | |
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| ID | 9138288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 2048844 |
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| End bp | 2049734 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003629620 |
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| Protein GI | 296121842 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.186801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCTGG GTTCACGCGA TTACTTTCGC GATGGCGATA ACGATCTGGA ATGGAATTCC
GATGCCCCTG GGGTACGCGG CATTATCATC ACCACGCTGG TCGCGCTGAT TCTTCAACTC
GTCTGGACAG TTCCGGTACC CGGCGGGCTC GATCGGGAAT CTTTGCTCGA CCGCTGGCTC
GAGATGGATA CGTCGGCTGT ACTTTCCGGT CAGATCTGGC GACTCGTCAC GTATGCTTTC
CTGCACGGCC TGAGCCCCTG GCACTTCATT TTCAACATGC TCTTCCTGTG GTGGTTCGGC
CCCACACTCG AACGCATGTA CGGCACGCGG GAATTCATTG CTTTCTATCT CTCGGCTGCT
GTGGCAGCCG CACTGGGTGG AGTAGCGTGG GATCTCAGCA TGCAGGATTC CAGCAAGATT
GTGGGAGCTT CCGGAGCCGT TCTCGCCACG ACCATGCTCT ATACGATGCA CTTTCCCAAG
CAGCCGATTG GCCTCTTTTT TGGTCTGCTG ACAGTGGAAA TGCGTGTCCT CATGGCCTTT
CTCGTATTCC TCGACGGCTT CTATGCACTG GCTCAATGGG GCGGACGCAT GGGAGGGACA
GGAGTGGCCC ATCCCGCTCA CCTGTTGGGT GTGGCGTTTG GTTGGGCCTA TTTTCACTTC
AACTGGAAGA TTTCCGGCCT GCTGAACATC TTCGAAAGCC TGCAGGAACG CTGGAAAATC
TACCGTGCCC GCAAGCGACT CAAAGTCTTT TCCCCCGAAC CCAGTTCACC TCTGGAAGAA
GATGTGGATC GAATTCTCGC GAAAATTCAC GAGCAGGGAG AAGCTTCTCT CACACCCAAA
GAGCGTGAGA TACTCACAAA AGCTTCCCGG GCTTATCGTG AACGTCGCTG A
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| Protein sequence | MGLGSRDYFR DGDNDLEWNS DAPGVRGIII TTLVALILQL VWTVPVPGGL DRESLLDRWL
EMDTSAVLSG QIWRLVTYAF LHGLSPWHFI FNMLFLWWFG PTLERMYGTR EFIAFYLSAA
VAAALGGVAW DLSMQDSSKI VGASGAVLAT TMLYTMHFPK QPIGLFFGLL TVEMRVLMAF
LVFLDGFYAL AQWGGRMGGT GVAHPAHLLG VAFGWAYFHF NWKISGLLNI FESLQERWKI
YRARKRLKVF SPEPSSPLEE DVDRILAKIH EQGEASLTPK EREILTKASR AYRERR
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