| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1582 |
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| Symbol | |
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| ID | 9138282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 2038990 |
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| End bp | 2040561 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003629614 |
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| Protein GI | 296121836 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAATG TTTTCACGAA AAAGCTGTCG TTACGACGGT GCGGCCTGGC TCAGGTTCGC
CTCCAAAGAT GTGTCGTACT GACATCGCTG ATTCTTCTGC AGTTTTTGCC GCTGATCGCA
GTGGCGTCAG AGCCAGCTCC TAAGGGGAAG CTGTGGCGCT GGCTCAAACC AGTGCGAGCC
ACCTCTGAAG CTGCTCAAAA GCAGCCTGCT GAAAATCAGG ATCACAAAGT CGCGTCTCAA
GATGTCTCAG AGGAAGCTCA TCAGCCGCTG GAGCAGGTTT CTCTGGAAAT GCCTGCAGGC
ACATCTCGTG TTCCTCCGGT TCCGCCAGCT CCTGATGAAG CGGCTTCCTA CAAAGACGTG
ACCTCTTATG AGATTTCTCC GGGGACTGCC GAAATTGCAA TCCTTCCTCA GCAGAATGTC
TACTCTCTGG AAGATTTGTC GACTTTCGCT GAGATGTATC ACCCAAGGCT CACGACGGCT
TTCCGCAAGA TTCAATCGGC ACAGGGAGCC ACTGTGCAAG CGGGGTTGTA TCCCAATCCT
CGCATTTCCG CCTCATCACC TCAAATTGAT GGCAATGAGA GTCAGTACAA CGGTTTCATC
TCTCAGGAAA TCGTGACGGC ACGAAAGCTA AAGATCAGTG CCGCTGCTGC TCAAACGGCT
GTCACGCAGG CACAGTACGA ATGGCAACAG GAACGATTTA TCGTCCTGAC GGAATTGCGT
CAAAAGTATT ACGCGGTACT GGCCGCACAG AAGCGGACTC GAATCCTCGA AGAACTCGTC
AGCATTGCCG CACGATCACT CGATATTTCG GAAAGATTGT TCAAGGCAGG TGAAGGTGCC
AAGTCAGACA TTCTGCTGCT TGATATTGAA CGCCGCCGTT CAGAAGTCGC CTTGCAGAAT
GCACAAACCA TTTACAACGT GGGCAAAAGG CAACTGGCTT TGCTGGTCGC CTGCCCCGCT
TTAAGTATTC AATCAGTCAG CGGCGACTTG AATGCCGAAG CAAGAAGTTA TCAACTCGAC
GAAATCCAGG TCGCGGCAGC CAATTTTCAT CCTCAGGCGA GCATCGCCCG GCTCGAAATC
GAACGCATGT CCCGCCTGCT GCAGCGTGCT CGCGTAGAAC CTGTTCCCAA CTTTGACGTC
ATGGGTGGAT ACCAGCGGCA GATTGGTGTT CCGGCTGAAA ATCAGGGCTT GTTCCAGGTC
ACTATGAGTG TGCCCCTCTG GAATCAGAAT CAGGGAAATA TCTCTTCTGC AGAGGCGAGT
CTTTCCGGAG CCAGAGCCGA TCTTCAGAAG ACGGAACTCG AACTTTCCAA CCTCGCTGCA
CAAGCCTATG CCACCTACGA AACATCCCGG CAACTGGTGG AAAAGTATCA CATCGAAATC
CTGCCTCAGG CCCGTGAAAC TCTGGCAATC AGTCAGACAC TCTACGCGCA AGGGCAGATC
GATTTTCTCA GATTGCTGCA ATCTCAAAGA ACACTACTCG AAACCGAGCT GGCATCAATT
GAAGCTCAGG AGCAGTATTG GGTCTCAGCC GCCGGGATTG CTGGTTTGTT GCAGGAAAAC
CAGTTTCCTT AA
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| Protein sequence | MLNVFTKKLS LRRCGLAQVR LQRCVVLTSL ILLQFLPLIA VASEPAPKGK LWRWLKPVRA
TSEAAQKQPA ENQDHKVASQ DVSEEAHQPL EQVSLEMPAG TSRVPPVPPA PDEAASYKDV
TSYEISPGTA EIAILPQQNV YSLEDLSTFA EMYHPRLTTA FRKIQSAQGA TVQAGLYPNP
RISASSPQID GNESQYNGFI SQEIVTARKL KISAAAAQTA VTQAQYEWQQ ERFIVLTELR
QKYYAVLAAQ KRTRILEELV SIAARSLDIS ERLFKAGEGA KSDILLLDIE RRRSEVALQN
AQTIYNVGKR QLALLVACPA LSIQSVSGDL NAEARSYQLD EIQVAAANFH PQASIARLEI
ERMSRLLQRA RVEPVPNFDV MGGYQRQIGV PAENQGLFQV TMSVPLWNQN QGNISSAEAS
LSGARADLQK TELELSNLAA QAYATYETSR QLVEKYHIEI LPQARETLAI SQTLYAQGQI
DFLRLLQSQR TLLETELASI EAQEQYWVSA AGIAGLLQEN QFP
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