Gene Plim_1513 details

Gene Information

• Locus tag: Plim_1513
• ID: 9138210
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 1951894
• End bp: 1952670
• Gene Length: 777 bp
• Protein Length: 258 aa
• Translation table: 11
• GC content: 56%
• Product: protein of unknown function DUF549
• Protein accession: YP_003629545
• Protein GI: 296121767

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.221061
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTTG ATGATCTCGA CAACAAGATG AGGGTCTTCG AGACCGCTGC CGACCTGTGC 
GTGCTGCCCG GCATGTTCAT GGTCGCTCGT CTCGATGGTC GGAGCTTCAC CCGGTTGACC 
AAAGATGTCT GCCCGTTTGA GGCTCCCTTC GACGAGCGAT TCCGTGACCT GATGGTCTCC 
ACCACGGAGT CGTTGATGAA CTGCGGCTTC CGGGTGCTGT ACGCTTACAC CCAAAGCGAT 
GAGATCTCGC TGCTCTTCGA TCTGGAAGAA CAACTCTTCG GCAGGAAGCT GCGGAAATAC 
AACTCGCTAC TGGCAGGTGA AGCCAGTGCC CAGTTCTCAC TGAAGCTGAG GCAACCCGCG 
TGCTTCGACT GTCGGATTTC CCAGTTGCCT ACTTCAGAAC TGGTCGTGGA CTACTTCCGC 
TGGCGCAACG AAGACGCCGC TCGCAATGCC TTGAGTGCCT GGTGCTACTG GACGCTTCGC 
AAGGATGGCC AGAACGAACA GCAGGCCACG AAACGGCTGC TTGGCCTGTC CGTGAGTCAG 
AAGAACCAGT TGCTGTTCCA GAGCGGCATC AACTTCAATG ATCTCCCGAA CTGGCAGAAG 
CGGGGCGTCG GATTTTACTG GGAAGAGTAC GATCGGCCTG CCATGAACCC GATTACAAAG 
GAAAAAGTCA CGGCACGTCG GCGCCGGCTT CACACCGACT TCGATCTACC GATGCAAGAC 
GACTACAGCC AATTCGTGCG GTTGATTGTT TCCAAACCTC AAACACCAGG AGCCTGA 

 

Protein sequence

MKFDDLDNKM RVFETAADLC VLPGMFMVAR LDGRSFTRLT KDVCPFEAPF DERFRDLMVS 
TTESLMNCGF RVLYAYTQSD EISLLFDLEE QLFGRKLRKY NSLLAGEASA QFSLKLRQPA 
CFDCRISQLP TSELVVDYFR WRNEDAARNA LSAWCYWTLR KDGQNEQQAT KRLLGLSVSQ 
KNQLLFQSGI NFNDLPNWQK RGVGFYWEEY DRPAMNPITK EKVTARRRRL HTDFDLPMQD 
DYSQFVRLIV SKPQTPGA