Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1509 |
Symbol | |
ID | 9138206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 1948644 |
End bp | 1950506 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | Citrate transporter |
Protein accession | YP_003629541 |
Protein GI | 296121763 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.355628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATTG AACTCGCAAT AGTTTTAGCG CTGTTGATTG CCGCCATCGT GATGTTTGCC ATCGACAAAC CACGGATGGA TGTTGTCGCC TTACTGATGC TGACACTGCT TCCCCTCACA CAAATCATTA CGGTCAATGA TGCCCTGCGA GGGTTTTCTG ACCCTAACAT TGTGCTGATT GCCGCACTGT TTGTGATTGG AGATGGCTTA GTTCGAACAG GAGTTGCTCG AAATCTGGGC GACTGGCTCA GTGCGAAAGC CGGCAGCAGC GAAACCCGCA TGATGGTTCT GCTGATGCTG GTCGTTTGTG GCTTAGGATC GACGATGAGT TCCACAGCCG TGACAGCGAT TTTTATTCCT GTCGTTCTGA GAATCTGCCA AAGCACGGGA ACTCCACCCA GCCGGTTAAT GATGCCACTG AGTTGTGCGG CCCTGATCAG TGGCATGATG ACCCTGGTGG CGACCGCCCC CAATCTGGTA GTCAACAGCG AACTCATTCG CTTTGCCGAA CAGCATCAGA CCGACAGCAC TGGCTTTCGA TTTTTTAGTT TTGCTCCCTT TGGAATCCCT ATACTACTGG CAGCGATTGG CTACATGCTC ATCGCTAGAA AATGGCTCCC TGCAACCAAC CCATTTGATT CCAAAGCCGA TACCAGGCAG CCCACGCTGG CCGGTTGGGT TGAGCAATAT GAACTGGCCA CACGGGAACA GCGAGTCCGC ATCAGTCACT CATCGCCACT GGTTGGAAAG ACGATTGAGG AAGTGGGCTT AAGAAATGCC GCCAGTGCCA GTCTGGTCGC CATTGAACGC GAACGCTCCG TCCTCCAACC CACGGCCAAA ACAATCCTCC ATGCAGGGGA TGTTCTCCTC GTCGATTTTT ACGGGCCCCC GGCTGACTCA GATGCTCTGA AGACTCAATT CGCCCTCGAA CCCATGCCAC TCAGTGGGCT CTACTTTACC GATCGTGCTC AGGAAATCGG GATGCTCGAA GTGATCATTC CTGTGGATTC CGAACTGGTC GGACAATCAC TTGTTTCCAG TGAATTTCGC AGCCGCTCGG GATTAACTGC GATTGGTTTG CGTCGCAGCA AGGCGGCTGT CACTGAAAAA CTGCGTGAAG AAACCCTGAA AGCAGGCGAT ACCCTGCTGC TGATCGGCCC CTGGAAAGCC ATCCGGCATT TGACGAAGGA CAGCAATTAT ATTGTTCCAT TGAGGTATCC TTCGGAATAC CATGATCTGC TGCCAGCACC GGGTAAAGCC CCTTATGCAG TGGTGAGCCT GCTCATTGTG ATTGGATTGA TGGTCTCCGG CGTGGTTCCT AATGTCCTGG CGGCACTGAT CGGTTGTCTT ATAATGGGTT TATTCCGCTG CATCACGATA GAAACTGCCT ACAAATGCAT CGACTGGAAG ACATTGATCC TGATTGTCGG CATGCTCCCC TTCTCGATCG CTCTGCAGGA AACGGGGGGA GTCGAATTGG CAGCTGAAAG TTTACGAACA GTCACCAGCA GTATGGGGCC GCGTGGAGTG CTGGCGATCC TGTTTATGAT CACCGCCATT TTGGGAATGT TCATTTCTAA CACCGCGACA GCCGTCTTGA TGGCACCTGT TGCATTAGCC ATGGCTGCCG ATATGCAAGC CTCGCCGTAT CCTTTTGCGA TGATCGTGGC CTTAGCTGCT TCAACAGCAT TCATGACTCC CGTTTCATCA CCTGTGAATA CACTGGTGGT CACTCCCGGT AATTATTCAT TCAGCGATTT TGTCAAAGTC GGTATCCCTC TAAGTATGAT CGTCCTCGTC ATCAGCGTCG CCATGGTTCC CTGGTTGCTG CCAATTTATC CGGCAGCTTC AGTCACGCCT TAG
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Protein sequence | MTIELAIVLA LLIAAIVMFA IDKPRMDVVA LLMLTLLPLT QIITVNDALR GFSDPNIVLI AALFVIGDGL VRTGVARNLG DWLSAKAGSS ETRMMVLLML VVCGLGSTMS STAVTAIFIP VVLRICQSTG TPPSRLMMPL SCAALISGMM TLVATAPNLV VNSELIRFAE QHQTDSTGFR FFSFAPFGIP ILLAAIGYML IARKWLPATN PFDSKADTRQ PTLAGWVEQY ELATREQRVR ISHSSPLVGK TIEEVGLRNA ASASLVAIER ERSVLQPTAK TILHAGDVLL VDFYGPPADS DALKTQFALE PMPLSGLYFT DRAQEIGMLE VIIPVDSELV GQSLVSSEFR SRSGLTAIGL RRSKAAVTEK LREETLKAGD TLLLIGPWKA IRHLTKDSNY IVPLRYPSEY HDLLPAPGKA PYAVVSLLIV IGLMVSGVVP NVLAALIGCL IMGLFRCITI ETAYKCIDWK TLILIVGMLP FSIALQETGG VELAAESLRT VTSSMGPRGV LAILFMITAI LGMFISNTAT AVLMAPVALA MAADMQASPY PFAMIVALAA STAFMTPVSS PVNTLVVTPG NYSFSDFVKV GIPLSMIVLV ISVAMVPWLL PIYPAASVTP
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