Gene Plim_1470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1470 
Symbol 
ID9138167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1892630 
End bp1893838 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content53% 
IMG OID 
Product8-amino-7-oxononanoate synthase 
Protein accessionYP_003629502 
Protein GI296121724 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000728084 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTTC GAGCCCTATC TGCTTTGGAG CAATGGCAGG ATTCCCTCCA GGAGGACCTG 
CATCAACTGG AGGTGGGGAA TCTCCGGCGT TATCGGCGGA CTTTTGAACT GTTGCCTGAT
GGAAGTCTGC TGTCTGACGG GCAGCGTCTC GTAAACCTCT CGGGGAATGA TTACCTCGGA
TTATCATACG AACCGCGTGT GATTGCCGCT GCCACGAAAG CGATGGAATC GACGGTCGGA
GCAAGAGCCA GTGCTTTGGT GAGTGGTCGG TCCCATTGGC ATGCTCAGTT GGAGAAGACA
ATTGCCGAGT TTGAAGGATG TGAAGATGCC CTCGTTTTCC CGACAGGGGT CGCTGCCAAT
GTGGGTGTGC TGACTGCACT GATCGGTGAA AATGATGTTG TCTATTGTGA TCGACTGAAT
CATGCCAGTC TGGTCGACGG CTGCCGGCAG AGCGGAGGTC GATTCCGCAT CTATCATCAT
CACGATCTGT CGAGTCTCAA GCGGCAATTG ATGCAGCCGT TTGATGGTGG TCGCAGGTGG
ATTGTCACTG ATGGTGTCTT CAGCATGGAT GGAGATATTG CTCCACTGAG AGAGCTTTGT
GAACTTGCTG AAGCATATGA TGCTCTGGTG GTCGTGGATG AAGCTCATGG GACTGGAGTA
TTCGGCGAGC GGGGAAGAGG TGTCTGCGAA TATCTGGATG TTGAGGATCG AGTCGCCTTA
AAGATCGGGA CACTCAGCAA GGCCATTGGT GCTCTGGGCG GGTTTGTGAC TGGCAGGCGA
GTGTTATGCG AATATTTGCT CAATCATGCC AGGACGCAGA TTTATTCGAC GGCTTTACCA
CAAGCAATCT GCGCAGCGGC TACGACAGCA ATCGAGATTA TCGGTCAGGA GCCAGAACGC
AGACAGCGGT TGTGGCAACG GGTGGACTTT GTTCGCGAAC GCATGATTGG CCTGGGCCTG
TTGTCAGAAA AGAGTTTTCG CAGTCCAATT CTTTCATTAG TGCTGGCGGA GCCAGCTCAT
GTCGTGGAAG TGGCTCGCCA ACTGGAGGTC GAAGGCTTTC TCGTCGCTGC AATTCGCCCG
CCCACAGTTC CTCGGGGAAC ATCGCGTCTG AGGCTCAGTC TGCACAGTGA ACTGAGCATT
TCTGATCTGC AACAACTGAG TCAAGTTCTG GCTGGGATCC TTTCGAATGG ATCAGAGCGA
GTGAATTGA
 
Protein sequence
MTFRALSALE QWQDSLQEDL HQLEVGNLRR YRRTFELLPD GSLLSDGQRL VNLSGNDYLG 
LSYEPRVIAA ATKAMESTVG ARASALVSGR SHWHAQLEKT IAEFEGCEDA LVFPTGVAAN
VGVLTALIGE NDVVYCDRLN HASLVDGCRQ SGGRFRIYHH HDLSSLKRQL MQPFDGGRRW
IVTDGVFSMD GDIAPLRELC ELAEAYDALV VVDEAHGTGV FGERGRGVCE YLDVEDRVAL
KIGTLSKAIG ALGGFVTGRR VLCEYLLNHA RTQIYSTALP QAICAAATTA IEIIGQEPER
RQRLWQRVDF VRERMIGLGL LSEKSFRSPI LSLVLAEPAH VVEVARQLEV EGFLVAAIRP
PTVPRGTSRL RLSLHSELSI SDLQQLSQVL AGILSNGSER VN