Gene Plim_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1460 
Symbol 
ID9138156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1884015 
End bp1884431 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content50% 
IMG OID 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_003629493 
Protein GI296121715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCACTGA AAACAGAACC GCTGGAAGAA CCGACGCTGA ACCTGGCCTC GATGCTCGAC 
ATCGTGATGC TGCTGCTCAT GTTCTTCATG ATTGGTACAC AGTTCAAAAA TCAGGAACGC
GAGTACAAAA TTCAACTTCC AACGGTTTCC GACGCCAAGG CACTTAGTGG TCAACCCGAC
GAACTGGTGG TCAATGTCTC GCGGGACGGG GTGATTACTT TGAACTCCCG CCAGATTTCA
ATCGCAGAAC TGGAACAAGA ACTGGCAAAA GCGATTCAGA ATTTCCCGGC ACAAAGCGTA
TTAATTCGCG GCGATGGTGC CAGCCCGTAC CAGAATGTGA TGGAAGTGAT GTCGGCTGCA
AAAAAAGTTG GAGTGCGTAA CGTCTCTCTG GCACATCAAC CACGATCTCA ACGGTGA
 
Protein sequence
MPLKTEPLEE PTLNLASMLD IVMLLLMFFM IGTQFKNQER EYKIQLPTVS DAKALSGQPD 
ELVVNVSRDG VITLNSRQIS IAELEQELAK AIQNFPAQSV LIRGDGASPY QNVMEVMSAA
KKVGVRNVSL AHQPRSQR