| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1441 |
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| Symbol | |
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| ID | 9138136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 1851967 |
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| End bp | 1853763 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | CRISPR-associated protein Cas1 |
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| Protein accession | YP_003629474 |
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| Protein GI | 296121696 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0376991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAGCC CTGTCCCCGG CCCACCTTCT CTCGATCTCG AAGCGCTCTT CACAGGGGAA
GGAGAAAATC AGTCACAGTC GGCTGATGAT CTTATTCCCG CTCGTATGCT CAACGAATTC
ACCTACTGCC CCAGACTGGC TTACCTTGAA TGGGTGCAAG GTGAGTTTCG AGACAACATC
GAGACCAAAG AAGGGACATT CGGACATCGA AATGTGGATA TCCCCACCAA AAAATCATTC
GATGCTCCTG ATGAAAACCC AGACGAATCT TCTCACCATG TCAGTGAAGG TTCTGCAATC
CAGGAGATCA CAGCCGACAG CTTGGCGGCT CGGGCTTTGA TGCTCTCTGC ACCCTCTGAA
GGATTGCTGG CCAAACTTGA TCTGATTGAA CTGAAAGGTT CGAAAGCAGT CCCGATCGAC
TACAAAAGAG GGAACGTTCC CGATGTTCCT CACCAGGCTT GGGAACCAGA ACGGGTTCAA
CTTTGTGCTC AAGGCTTGAT TCTGAAGGCC AATGGCTACG AATGCGACTA TGGCGAATTG
TATTACATCG AATCCCGACG CCGGATTCGT GTTCAATTTG ACGACACCCT GATTGCCCGC
ACGCGCGAAC TGGTTCGCGA AATGCGGCAC ATGGCCTCCA CACGCCAGAT TCCCGCCCCG
CTTGTTGATA GCCCCAAATG TCCGAAATGT TCTCTTGTCA GCATTTGCCT CCCCGATGAA
ACCAATTGCC TTAGAAATAG CACCAGGGAA GATTCGGCTC CAGAGAGCTC GGAAAGTATC
CGCAAACTTG TTCCCGCCCG TGACGATGCA CTGCCAATTT ATGTTCAGGA TCAAGGAACC
TATATAGGCA AAGATGGCGA GCGTCTGAAA CTGACTCCCG CGAAATCCTC TCCACTGTTC
ATTCCACTCA TTCAAGTTTC ACAAGTTTGC CTGATGGGGA ATGTGCAGGT CACAGCCGCT
GCAATTCGAG AACTGGCGGA CCGCAATATC CCCATCAGTT ACTTTTCCTA CGGCGGATGG
TTCACGGCAC TCACTTCGGG AATGTGCCAC AAAAACGTCG AGTTGCGCAT GGCCCAGTCG
AAGGCGGCTT TTGATCCTCA GGCCGCCCTG TCGATAGCGC GTGGTTTCAT TTCTGCAAAG
ATCAAAAACT CACGCACACT GTTAAGGCGA CACGCTGACG ACAAGCATAG AAGCGATCTC
GACCGCCTTG CTGATTACAT TCAGAAAGTC GAGCAGGTCG ATAATTTGAA TTCTCTCATG
GGCCTGGAGG GAATGGCTGC GAAGACCTAT TTTGCAGGAT TTTCCAGATT GCTTAGAGGT
GGAGATGAGT TCAATCTCGA AGGGCGTAAT CGCCGCCCTC CGACCGATCC CGTCAATGCG
CTTCTATCTT TTGTCTATTC GCTGTTAACC AAAGAGTTGA CGATCACGAC ACAAGCTGTC
GGCTTCGATC CATTCCTCGG ATTTCTGCAC CAGCCTCGCT ATGGCAGACC TTCTTTAGCA
CTTGATCTTG CCGAAGAGTT CCGTCCGCTC GTGGGAGACT CAACAGTGCT TACGCTCATT
AACAACGAGG AAGTCAGCCC AAAAAGCTTT ATCCGTCGTG CAGGAAGCGT CGCTTTGACA
GAAACAGGTC GCAAAGCCGT CATTGCCGCT TATGAGCGGC GGATGGAAAC CGAGATTACG
CACCCCATCT TCGGCTACAA GATCAGCTAC CGCCGGCTTT TTGAAGTCCA GGCTCGCTTA
CTTTCCCGAG TTCTACTTGG CGAACTCGAT AAATATCCTG GCTTCTGCAC TCGTTAA
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| Protein sequence | MISPVPGPPS LDLEALFTGE GENQSQSADD LIPARMLNEF TYCPRLAYLE WVQGEFRDNI
ETKEGTFGHR NVDIPTKKSF DAPDENPDES SHHVSEGSAI QEITADSLAA RALMLSAPSE
GLLAKLDLIE LKGSKAVPID YKRGNVPDVP HQAWEPERVQ LCAQGLILKA NGYECDYGEL
YYIESRRRIR VQFDDTLIAR TRELVREMRH MASTRQIPAP LVDSPKCPKC SLVSICLPDE
TNCLRNSTRE DSAPESSESI RKLVPARDDA LPIYVQDQGT YIGKDGERLK LTPAKSSPLF
IPLIQVSQVC LMGNVQVTAA AIRELADRNI PISYFSYGGW FTALTSGMCH KNVELRMAQS
KAAFDPQAAL SIARGFISAK IKNSRTLLRR HADDKHRSDL DRLADYIQKV EQVDNLNSLM
GLEGMAAKTY FAGFSRLLRG GDEFNLEGRN RRPPTDPVNA LLSFVYSLLT KELTITTQAV
GFDPFLGFLH QPRYGRPSLA LDLAEEFRPL VGDSTVLTLI NNEEVSPKSF IRRAGSVALT
ETGRKAVIAA YERRMETEIT HPIFGYKISY RRLFEVQARL LSRVLLGELD KYPGFCTR
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