Gene Plim_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1395 
Symbol 
ID9138090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1775492 
End bp1776928 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content52% 
IMG OID 
Productfumarate lyase 
Protein accessionYP_003629428 
Protein GI296121650 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCCA ATGCCCGACG ACATGAACTC GATCCGCAAG TCCGAATCGA GCACGATTTA 
ATCGGCCCCA AAGAAGTACC TGCAGATGCC TATTTTGGCG TACAAACAGT CCGAGCGATC
GAAAACTTTT CGATCTCAGG TGTGCCGATC AATCATTACC CGCATCTGAT TCGAGCGCTG
GCTATGGTGA AAATGGCTTG TGCGAGAGCC AATTTTGATG TGGGTAAACT CTCTCCCGAA
ATTCTGGCTG GCATTGAGAA AGCCTGCGAA GATCTCATTG AGGGCAAACT TCACGAACAC
TTCGTACTGG ATGTCCTTCA GGGCGGGGCT GGCACATCGA CCAATATGAA TGCCAACGAA
GTCATTGCCA ACCGGGCACT GGAGCATATG GGTTACACCA AAGGTGAGTA TCGCTTCTGC
GATCCCCACG ACCATGTCAA CAAATCTCAA TCCACCAATG ACGTCTATCC TTCAGCACTT
CATCTGGCTC TGCTCCTGGG CAACGCCGAC CTGATGGCTG AATTCCGCCT GCTGATCAAT
TCCTTCCGCG CGAAAGCCGA CGAATTCTCT GATATCGTCA AGATGGGACG CACCCAGCTT
CAAGATGCAG TCCCCATGAC TTTAGGTCAG GAGTTTCTGG GCTGGGCCAA CAGTCTCGAA
GATGAGCTTG ATGCGCTCCA GTTCGTCGAA CAGGTGCTCT ACGAGGTGAA TCTGGGCGGG
ACTGCGATTG GAACGGGCCT CAATGCCCCT CGAGGCTATG CCGCCAAATG TGTCGAACAT
CTCGCTGTCA TTTCAAAAAA GCCGATTCAT CTGGCTCGAA ATCTCGTTGA AGCCACGCAG
GATACTCAGG CCTTTGTGCT CTACTCAGCC ACACTCAAAA GTCTGGCCAT TAAACTCTCC
AAAATCTGTA ATGATCTGAG ATTACTCTCT TCCGGCCCAC GAACTGGTAT TAACGAAATC
AACCTGCCAG CGTTACAGCC AGGCTCAACA ATCATGCCCG GTAAGGTCAA TCCGGTGATG
CCGGAAGTGG TCAACATGGT CTGTTTTCGG GTCATTGGCA ACGACCTGAC AGTCACGATG
GGTGCCGAGG CGGGCCAATT ACAGCTCAAT GTGATGGAAC CTGTAATCGC AGCCTGTCTG
CTCGAATCAC AAACGCTCTT TATGAATGCT GCCCGATCGT TACGAACCTT CTGCATCGAC
GGAATCACGG CCAATCGCGA TGTTTGCCAG CGGTACATCG AACAGAGTGT TGGCGTGGTC
ACGGCATTGA ATCCTCTGCT CGGATACGAG AAGGCGACTG TTCTTGCCGC TGAAGCCATG
CGAACGGGCA AAGGGATTGT GCAACTTGTT CGTGAACAGC AACTGCTGAC TGAAGAGCAG
ATTCAGCATG TGCTCGATCC CTCAGTCATG ACAGGGCGAT CCTCACATCG AGAGTAA
 
Protein sequence
MTANARRHEL DPQVRIEHDL IGPKEVPADA YFGVQTVRAI ENFSISGVPI NHYPHLIRAL 
AMVKMACARA NFDVGKLSPE ILAGIEKACE DLIEGKLHEH FVLDVLQGGA GTSTNMNANE
VIANRALEHM GYTKGEYRFC DPHDHVNKSQ STNDVYPSAL HLALLLGNAD LMAEFRLLIN
SFRAKADEFS DIVKMGRTQL QDAVPMTLGQ EFLGWANSLE DELDALQFVE QVLYEVNLGG
TAIGTGLNAP RGYAAKCVEH LAVISKKPIH LARNLVEATQ DTQAFVLYSA TLKSLAIKLS
KICNDLRLLS SGPRTGINEI NLPALQPGST IMPGKVNPVM PEVVNMVCFR VIGNDLTVTM
GAEAGQLQLN VMEPVIAACL LESQTLFMNA ARSLRTFCID GITANRDVCQ RYIEQSVGVV
TALNPLLGYE KATVLAAEAM RTGKGIVQLV REQQLLTEEQ IQHVLDPSVM TGRSSHRE