Gene Plim_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1328 
Symbol 
ID9138022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1696551 
End bp1697225 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content57% 
IMG OID 
Productprotein of unknown function DUF159 
Protein accessionYP_003629361 
Protein GI296121583 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCGGTC GGTACACCCT CAGAACTCAT CTCAACCAAC TGCTCCAGCT CTATGCTGCC 
CAGTCGCAGG TCGAGTGGGA GCCACGCTAC AACATCGCTC CCACACAGCA GGTCGCTGCT
GTCCGTTCCA TCCCTGATTC GACTTCACGG GAACTGGTGC TGTTGCGATG GGGACTGGTA
CCGGCCTGGG CGGACGACCT CAAAATCGGC AACCACATGA TCAATGCCCG TGCGGAGACT
CTCGCCGAAA AACCGTCGTT CAAGACCGCA CTGAGACGCC GCCGCTGTCT CGTCCTGGCG
GACGGCTTCT ACGAATGGAG GCAGGAAGGC AAAATAAAAC AGCCCCTCTT CATTCGCATG
AAGGACGCAA AACCGTTTGC ATTCGCCGGT CTTTGGGAAC GCTGGACGAA ATCCGGCACG
CCCATCGAGA CCTGCACGAT CATTACGACG AACGCTAACA CCCTCATGTC GGAATTGCAC
GACCGCATGC CGGTCATCCT TTCCCAGGCT GCTGCTGATA TCTGGCTGGA TCAGGACATC
GAACAACCGG AGCCGCTGCT GTCGTTGCTC GGCCCCTATC CCGACGATGA GATGGAGGCT
TATCCCGTCA GCACGCTGGT CAATTCACCG AAGAATGAAT CCAGCGAATG CATCGTCCCA
ATCGCATCGG AGTAA
 
Protein sequence
MCGRYTLRTH LNQLLQLYAA QSQVEWEPRY NIAPTQQVAA VRSIPDSTSR ELVLLRWGLV 
PAWADDLKIG NHMINARAET LAEKPSFKTA LRRRRCLVLA DGFYEWRQEG KIKQPLFIRM
KDAKPFAFAG LWERWTKSGT PIETCTIITT NANTLMSELH DRMPVILSQA AADIWLDQDI
EQPEPLLSLL GPYPDDEMEA YPVSTLVNSP KNESSECIVP IASE