Gene Plim_1323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1323 
Symbol 
ID9138017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1689448 
End bp1689945 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content56% 
IMG OID 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_003629356 
Protein GI296121578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACAC CTCCTTCAGT TCCACTGGTT GGCGTGATCA TGGGGAGCCG CTCCGATTGG 
GAAACCATGC GGGTGGCGAC AGAAGTGCTC ATGAGTTTTG GTGTACTGTT CGAATCGAAG
ATTGTCTCTG CCCATCGTAC TCCGGAGTGG ATGTGCGAAT ATGCCAGGTC AGCCGAGGAA
CGTGGCATCA AGGTCATCAT TGCCGGAGCT GGAGGTGCAG CCCATTTACC CGGGATGGTG
GCCAGCCAAA CCATATTGCC AGTGCTGGGA GTTCCTGTTC AGAGCAAGTC GCTGCAGGGG
CTCGACTCAC TGCTTTCCAT CGTGCAGATG CCGGGTGGCA TCCCTGTTGG AACATTGGCG
ATTGGCGAAG CGGGCGCACG CAATGCCGCC TTATTGGCAA TCCGCATACT GGCCATTTAC
GATTCTTCGC TGGCAGAACG CCTGCATCAA TTCCATCACG AACAGCGGAC GAAAGTCCTC
TCTGAGACGC TTCCATGA
 
Protein sequence
MQTPPSVPLV GVIMGSRSDW ETMRVATEVL MSFGVLFESK IVSAHRTPEW MCEYARSAEE 
RGIKVIIAGA GGAAHLPGMV ASQTILPVLG VPVQSKSLQG LDSLLSIVQM PGGIPVGTLA
IGEAGARNAA LLAIRILAIY DSSLAERLHQ FHHEQRTKVL SETLP