Gene Plim_1265 details

Gene Information

• Locus tag: Plim_1265
• ID: 9137959
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 1619359
• End bp: 1622889
• Gene Length: 3531 bp
• Protein Length: 1176 aa
• Translation table: 11
• GC content: 53%
• Product: DNA polymerase III, alpha subunit
• Protein accession: YP_003629298
• Protein GI: 296121520

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.166444
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTTCAT CACGCCCCTT CGCACACCTG CATTGTCACT CACAGTTTAG CCTGCTGGAT 
GGTGCGACAA GACTCGACGG TCTGATCAAA AAAGTTAAAG CTTCGGGGAT GAACTCCGTC 
GCGATTACCG ATCATGGGAA TCTGTATGGC GCGCTCGACT TCTATCTGAT GGCCAAAGGG 
GCTGGCGTTA ACCCCATCCT GGGGATGGAA GCTTACATTG CTCCCGGGTC ACGACTCGAA 
AAGTCCGGGG CCTCTCGTAT GAAAGAGGCC AGTTACCATC TGACACTGCT GGCCATGAAC 
CGAGTGGGAT TCCAGAATCT TGTCAAACTT TCGTCCAAGG CATTCATTGA GGGCTTTTAC 
TACAAGCCCC GCATCGATAA AGAAATTCTG GAAGCTCACA GCGAAGGATT GATTTGTCTT 
TCCGGTTGTG CGGCTGGAGA GCTTTCGCAG CATTTACTAG GTGAGCGATT CGAAGAGGCC 
GAGAAGCTGT GCCACTGGTA TTCGCAGACA TTTGGCGACC GCTTTTTTAT GGAGATTCAG 
AACGCGGGAT ATCAGATCCA GCGGGATTGT CTCGAACGGA CGGTCGATCT GGCGAAGAAA 
ATGGGCTTAC CACTCGTCGC CACCAATGAC GCCCACTATC TGAATACCGA AGATGCCGCT 
GTTCAGGATG TCCTGCTCTG TGTGAATACG AAGTCGGAAC GCAGTGACCC GAAGCGGATG 
AAAATGGAGG GTAACCAGCT CTTCGTTCGC ACACCCGAGG AGATGTACGC GGCATTTGAG 
GGTTTCGAAG ATGCCGTCGC GAGGTCACAG GAAATTGCTG ATCGGGTCGA TATTGATCTC 
GACCTGAAGA CCAGGCACTT TCCTGTCTTT ACCACGCCTG AAAACAAACG GGATATCGAT 
TATCTGCGAG AACTGTGCGA AGAAGGTCTC AAATGGCGTT ATGGCGAAGA GAATATCCGC 
CAGGAGCATC GCGATCGACT CGCTTTCGAG CTGAGTGTGA TCGAGAAAAT GGGCTATCCC 
AGCTACTTCC TGATTGTGTG GGACTTTGTT CGATTTGCTA TCGAGAAAGG GATTCCCGCC 
AGTGCGAGAG GTTCGGCGTG CGGTGCTCTC GTCGCCTATG TGCTAGGGCT GAGTCATGTC 
TGCCCCATCA AGTACGATCT CCTCTTTGAA CGCTTTCTTG ATCCCAGTCG TACCGAGCCA 
CCGGATATCG ATATCGACTT CTGCCGGGAT CGAAGGCAGG ACGTGATTGA CTACACCAAG 
GCCAAATACG GCGAAGCGAA TGTTTCACAG ATTGGCACCT TTGGAACATT GAAGGCCAAG 
GCCGCCATTC GCGATGTCGG CCGCGTGTTG GCAGTCCCAC TGAAGCGTGT GGATGAGATT 
GCCAAGCTCG TCCCCGAAGA ACTGGGTATT GAGTTAAAAG AGGCGCTAGA GAAAAGCAGT 
GATCTGAAAG CGGCCTACGA TACAGACCCG CAGATTCGCG AGCTGTTTGA TTACGCCATT 
CAACTCGAAG GCCTGGCCCG CAGTGCTGGC ACTCATGCCG CAGGTGTGGT GGTTTCTGAT 
CGTCCGATTT CCGACTACGT GCCACTGCAG ACCATCAGTG GCAAGACAGA CCTTGTCACG 
CAATGGGAAG GGCCCACAGT CGAGAAGGCC GGTCTTCTCA AAATGGACTT TCTCGGCCTG 
CGAAATCTCA CAATTCTTGA TAAGGCCGTC AAGAACGTTG CTCTTCATCG GGGAGTAACC 
ATCGACCCAG TGAAGTTGCC ACTCGATGAC AAGGAGACTT ACGCGCTTCT GCAGCGTGGT 
GAAACCAAGG GGATCTTTCA GCTCGAATCG GGCGGCATGC GCGACCTGCT GACCAAGATG 
AAGCCTGATA GTTTTAACGA CATCATTGCA ACATCGGCGC TTTATCGCCC TGGGCCACTG 
GAAGGTGGCA TGGTGATGAC TTATGTCGAA GTGAAGCATA AACGGGCACC GTTGCCGCGT 
GTTCATCCCA TCATGGATAC CATCCTGGAT GAAACGTACG GCGTGATGGT TTACCAGGAA 
CAGGTGATGC GAATTTTGAA CCGGCTGGGT GGCATCGAAT TGCCTCAGTC GTATCAGTGC 
ATCAAAGCCA TCAGTAAGAA AAAACTCGAG ACAATTGCCA AGTATAAAGC TCAATTTGTG 
GAGGGATCGC AGAAGAACGG CTTGCCGGAG GCGAAAGCCA CCGAACTGTT CGAAATGATC 
GAGAAGTTTG CCGGCTATGG CTTCAACAAA TCTCACAGCA CGGCCTATGC CGCAGTAGCC 
TACCAGACCG CTTTTTTGAA AGCGCATTAT CCCGCAGAGT TCATGGCAGC GCTTCTTTCG 
TGCGAAATGG AAGACACCGA CCGGATTAAC GAGCATATTG ATGATTGCCG GCGGATGAAC 
ATTGAGATTG TGCCGCCCGA CATCAATCAC TGCGATGTGG AATTCACGGT TCGCGGGCCA 
CGTCAGGTGG CCTTTGGATT AGGAGCCATC AAAGGTGTTG GTGAGGCGAC CACGCAGGCA 
ATTGTCGAAG CTCGACAGTT GAAAGGCCCT TTCACCAGCA TTTTTGATCT GTGTGAACGT 
GTCGATGCCA AGAGCCTGTC GAAGGGTTCA TTGGAAATTC TCGTAAAGGC TGGGGCACTT 
GATAGTATTT CGCCGAAACG CGCTTCCCAG TTCGCGTGTA TTGAGCGGGC TGTGCAGGCG 
GCACAGTCGC TACAGAAAGA CAAAGCCCGG GGGCAGAAGA ATCTGTTTGG CGGTGATGAA 
GCGGATTCTC AGCCCGGTGA AAGCACTTCG TCGGCGACAC TTCCCGATGT GCCTGAATGG 
TCACATCGAG AAAAACTGGC TTATGAGCGA GAAGTTTTGG GATTTTACCT GACATCTCAT 
CCGCTCACCG AGCAGGCCGA AACGATCGGT CGATACACGT CTTATCAGGC GATGCAACTG 
GCCGAACTTG AGGATGGTGT CGAGGTGATG CTGGGAGGGA TGGTTTCCTC TATTAAGAAG 
GCCACCACAA AGAAGCCCAG CCGTAATGGG CACAGCCGGT ATGTGAACTT CGATCTGGAA 
GATCCGACAG GTGTGGTGCG GTGCATTATG TGGCCTGAGC AGTATGCGGT GGCGGGCGAA 
AAAGTCGTTG CGGATGAGAT TCGCTTCGTT AAGGGAAAGG TCGATAAGCG GAGCCGTGAG 
CCGAACGTGG TGATTGACCA GATCTGGACG ATGGCCGAAG TGGAGCGGGA TTTTACCAAA 
GCACTGGCGA TCAAGTTCCA GCGGGGGATT CACGATGCGG CTGTGATTCA GCGAGTCAAA 
GATCTCCTGG GCAAATATCC TGGCAAATCC GAAGTGATCA TTGTGGTGGA TACCATCGAT 
GAGGCGGATC CTGATCAGCG GTTGAGATAC ACGGCCCTTA AGCCCTTACC AATCAAGGTT 
TCGTGCAATC AGGATTTACG CGAAGGGCTG AATGATGCAC TGGGCGCAGG AAGTGTCTCT 
CTGGTAGCCG AACGCCGAGG GATGTCGCGT TCGGGAAGTA TTGGAAGGTA G 

 

Protein sequence

MTSSRPFAHL HCHSQFSLLD GATRLDGLIK KVKASGMNSV AITDHGNLYG ALDFYLMAKG 
AGVNPILGME AYIAPGSRLE KSGASRMKEA SYHLTLLAMN RVGFQNLVKL SSKAFIEGFY 
YKPRIDKEIL EAHSEGLICL SGCAAGELSQ HLLGERFEEA EKLCHWYSQT FGDRFFMEIQ 
NAGYQIQRDC LERTVDLAKK MGLPLVATND AHYLNTEDAA VQDVLLCVNT KSERSDPKRM 
KMEGNQLFVR TPEEMYAAFE GFEDAVARSQ EIADRVDIDL DLKTRHFPVF TTPENKRDID 
YLRELCEEGL KWRYGEENIR QEHRDRLAFE LSVIEKMGYP SYFLIVWDFV RFAIEKGIPA 
SARGSACGAL VAYVLGLSHV CPIKYDLLFE RFLDPSRTEP PDIDIDFCRD RRQDVIDYTK 
AKYGEANVSQ IGTFGTLKAK AAIRDVGRVL AVPLKRVDEI AKLVPEELGI ELKEALEKSS 
DLKAAYDTDP QIRELFDYAI QLEGLARSAG THAAGVVVSD RPISDYVPLQ TISGKTDLVT 
QWEGPTVEKA GLLKMDFLGL RNLTILDKAV KNVALHRGVT IDPVKLPLDD KETYALLQRG 
ETKGIFQLES GGMRDLLTKM KPDSFNDIIA TSALYRPGPL EGGMVMTYVE VKHKRAPLPR 
VHPIMDTILD ETYGVMVYQE QVMRILNRLG GIELPQSYQC IKAISKKKLE TIAKYKAQFV 
EGSQKNGLPE AKATELFEMI EKFAGYGFNK SHSTAYAAVA YQTAFLKAHY PAEFMAALLS 
CEMEDTDRIN EHIDDCRRMN IEIVPPDINH CDVEFTVRGP RQVAFGLGAI KGVGEATTQA 
IVEARQLKGP FTSIFDLCER VDAKSLSKGS LEILVKAGAL DSISPKRASQ FACIERAVQA 
AQSLQKDKAR GQKNLFGGDE ADSQPGESTS SATLPDVPEW SHREKLAYER EVLGFYLTSH 
PLTEQAETIG RYTSYQAMQL AELEDGVEVM LGGMVSSIKK ATTKKPSRNG HSRYVNFDLE 
DPTGVVRCIM WPEQYAVAGE KVVADEIRFV KGKVDKRSRE PNVVIDQIWT MAEVERDFTK 
ALAIKFQRGI HDAAVIQRVK DLLGKYPGKS EVIIVVDTID EADPDQRLRY TALKPLPIKV 
SCNQDLREGL NDALGAGSVS LVAERRGMSR SGSIGR