Gene Plim_1252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_1252 
Symbol 
ID9137946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp1604637 
End bp1605839 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content55% 
IMG OID 
ProductPhosphoglycerate kinase 
Protein accessionYP_003629285 
Protein GI296121507 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAAA AGACCATTGC CGATGTCGAC GTTCAGGGGA AGGCCGTTCT CATGCGGTGC 
GATTTCAACG TCCCGCTCGA TGACAATCTT GTCATTACCG ATGACCGCCG CATTACAGAA
GCTCTCCCAT CGATTGAATC CGTCCTCAAA CGAGGTGGTC GTGTGATTCT CATGAGCCAC
CTGGGACGTC CGGAAGGTGT CGATCCTGCG GCCGATGCGA AGTACAGCCT CAAACCTGTG
GCAGCCCGCC TGAAGGAACT TCTGGGAGTT CCCGTTCACT TTGCCAGCGA TACGGTGGGT
GCCGACGCCG AAGCCAAAGT GAAGGCTCTC CAGAACAATG AAGTTCTGCT CCTTGAAAAC
GTACGTTTCA ACAAAGGAGA GAAGAAAGGC GAAAACAGTT ACGTCAACAT TCTCGCCACC
TTTGGCGACA TCTACTGCAA CGACGCTTTT GGCACCTGCC ACCGTTCCGA AGGTTCGATG
GTCGGTGTGC CCAATGCCAT GGGGAACAAA CCCAAGGTCT GCGGCTTCCT CGTCGAGAAG
GAAATCAAGT TCCTCTCCGA TGCCATTTCG AATCCGGCCC GTCCATTTGT GGCGATTGTG
GGTGGGAAAA AGGTCGATGA TAAAATCAAC GTTATCAAGA ATCTGCTCTC CATCTGCGAT
ACGGTTTTGA TTGGCGGGGC GATGGCCTTC GCCTTCTCGA AGGCTCAAGG GGGCCAGATT
GGCAAGAGCT ATCTGCCGAA TCCGCCCGAA GCCAGCCTCG CGCTCGCCAA GGAACTGCTG
ACAATCGGCG GAGAAAAGCT GCAACTTCCC GTCGATACCC ATTGCGGCGA TGCCTTCAAG
GGTGACTGCA ACAAGATGAT CGCCAAAGCC GGCCAGATTC CCGAGAACTT CGAAGGTTTC
GACATTGGCC CGGAAACTCA GAAGAGATAT GCCGAGATCG TGAAAGCCGC CAAGACGATT
GTCTGGAACG GCCCGATGGG TGTCTTTGAA ATGCCTCCTT TTGATGCTGG GACTCGAGCG
GTCGCCGAGG CGATTGTTGC CAGCGATGCC ACCAGCATCA TCGGCGGTGG CGACAGCGCT
TCTGCCATCC AGCAGTTCGG TCTGGCCGAT CAGGTCACGC ATGTCAGCAC GGGCGGTGGA
GCCAGTCTCG AAATGCTTGA AGGCAAAAAG TTCGCTGCTG TCGAACTTCT CGACGACAAG
TAG
 
Protein sequence
MAKKTIADVD VQGKAVLMRC DFNVPLDDNL VITDDRRITE ALPSIESVLK RGGRVILMSH 
LGRPEGVDPA ADAKYSLKPV AARLKELLGV PVHFASDTVG ADAEAKVKAL QNNEVLLLEN
VRFNKGEKKG ENSYVNILAT FGDIYCNDAF GTCHRSEGSM VGVPNAMGNK PKVCGFLVEK
EIKFLSDAIS NPARPFVAIV GGKKVDDKIN VIKNLLSICD TVLIGGAMAF AFSKAQGGQI
GKSYLPNPPE ASLALAKELL TIGGEKLQLP VDTHCGDAFK GDCNKMIAKA GQIPENFEGF
DIGPETQKRY AEIVKAAKTI VWNGPMGVFE MPPFDAGTRA VAEAIVASDA TSIIGGGDSA
SAIQQFGLAD QVTHVSTGGG ASLEMLEGKK FAAVELLDDK