Gene Plim_1152 details

Gene Information

• Locus tag: Plim_1152
• ID: 9137840
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 1468786
• End bp: 1470837
• Gene Length: 2052 bp
• Protein Length: 683 aa
• Translation table: 11
• GC content: 53%
• Product: carboxyl-terminal protease
• Protein accession: YP_003629186
• Protein GI: 296121408

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTCAGC GATTGCCGTC TCGAGCGGTG GCAGGTCTTG TCGCATGTTT GTGCTTCATG 
GCTGCCTCCA CGATTTTTGC CCAGAACCTG GGGAAGACCT CCTCCAGTGA GCAAACGACT 
GCTCGCTTGG CTGCGGATAT GATCAGTAAG TACCACATCG GCCAAAAGCC GGTGGATGAC 
CGAATTTCCC AACTGACGTT TACCCGATAC TTGAAGGATC TTGATCCGGC GAAGCTCTAC 
TTCACCAAGG CAGATATCGA CGAATTCAGT CCCTACAAGG ACAAGCTGGA TGACCTGCTG 
AAGGCGGGGA ATGTGGAGTT TTCCCATCTG GTGTTCCAGC GTTATCTGCA ACGACTCACC 
GAACGGGTGG CGATTGCTCA CCAACTGATT GATTTGCCCC ACGACTTCAC CGTTGATGAA 
TCGATGGTGA CCGATGGCGA TCTGCTGGCG TACGCCGCCA CTCCCGAAGA GCTCAACGAA 
CGCTGGAGAA AACGCATCAA GTTTGAGCTC GTCTCGCTCT TGTTGGATGA CAAAACGATT 
GAAGAGGCCA GGAAGCAGGT GCATAAGCGC TACGACACGC TGCTGAAAGC TGCCAAGGGA 
ACGGAACCTT CCGAGATTCT CGAGATTTAT CTTTCGGCTG TGGCTCACTC GTTTGATCCC 
CATTCGAGCT ATATGTCGCC TCAGACTGTG GAAGATTTCC AGATTTCGAT GCGATTGAGC 
CTCGAAGGGA TTGGAGCGGC TCTGCGTTCC ATCGATGGTT ATGTCACGGT TTCTGAAGTT 
GTGCCTGGTG GTGCCGCCGA GAAGGATGGC CGTCTCAAAG CGAATGACAA GATTGTCGCT 
GTCGCCCAGG ACGGTGAAGA TTACGTCGAT GTTGTCGAGA TGAAGCTTAA TCGCGTGGTC 
CGCCTGATTC GTGGCATGGG CGGTACGAAA GTGAAGCTCA AAGTGGTGAA TGCTGCTAAC 
GAGACCAGCG AAGTCGTATT GACCCGTCAG AAAATCGAAC TGAAGGCCCA GGAAGTCAAG 
GGGGAGATTA TCCCGCTCGA AACTCGCATT CCTGGTGCCA AGGGCCGGAT TGGTGTGATT 
AATATTCCAT CGTTCTACCG TGATTTTGGT GGAGCACAGG CTGGACAGGA CAATTTCAAA 
AGCACGTCCC GCGATGTTGC CAAAGCCCTG CAGGAATTTG ACAAGCAGGG TGGAGTCGAT 
GCCGTCGTGA TTGATCTGCG AATGAATGGC GGCGGTGCCT TGACCGAAGC GATTGAAGTC 
TCAGGGCTGT TTATCGATCA GGGACCAGTG GTGCAGATCA AGGAACCCAA CGGCAAAATC 
AAGTCTTACG ACGACGAAGA CCCCGGAGTG ATGTACAAGG GCCCGCTGGT CGTCCTGTGC 
AATCGACTGA GTGCTTCTGC CTCGGAGATC TTTGCAGCGG CGATCAAAGA TTATGGCCGT 
GGGATCGTGG TGGGTGATAC CACAACGCAC GGTAAGGGGA CTGTGCAGCA TGTGATGCCG 
ATCAGTAATC GGATGTTCTC AGTACTCAAC AACCAGGATC TGGGTTCGGT CAAGCTGACC 
ATTAATCAGT TCTACCGGGT CAATGGTGAC AGCACGCAGA ACCGTGGAGT TCCTTCGGAT 
GTGGTGCTCC CTTCACTTGT CGATCACATG GATCTGGGGG AATCCTTCCT CGAGAATGCA 
CTGGCTTTCG ATCAGGTTCC CAAGGCGGCA CATCCTATTT ATGACATGAC ACCTGCCAAT 
GTTCTGGCTG CTCTGAAAGA ACAAAGTGCC CGTCGTATCG CTGCTGAAGC TGACTTTGAC 
AAGATTCGTA ATGATGTCAC ACGCTTCGAT GCTCGCAAGA ACCGCAAGAC GATCTCTCTG 
AATCAGGAAA CGCTCAAGAA AGAGCGCGAT GAAGAGAAGG CTGTGGAAGA GATCCGCAAG 
GAAGAGGAAG AGCACGAAAC CAAGGGAACC AATGGGCCAA TCTTCAAGAA GACGCCCTAT 
AATGATGAAG TGCTCAAGAT CGCCAGCGAG TATGTGACCT TGCTGCGTCA GGCGAAGACA 
GCCAAGCGAT AA 

 

Protein sequence

MIQRLPSRAV AGLVACLCFM AASTIFAQNL GKTSSSEQTT ARLAADMISK YHIGQKPVDD 
RISQLTFTRY LKDLDPAKLY FTKADIDEFS PYKDKLDDLL KAGNVEFSHL VFQRYLQRLT 
ERVAIAHQLI DLPHDFTVDE SMVTDGDLLA YAATPEELNE RWRKRIKFEL VSLLLDDKTI 
EEARKQVHKR YDTLLKAAKG TEPSEILEIY LSAVAHSFDP HSSYMSPQTV EDFQISMRLS 
LEGIGAALRS IDGYVTVSEV VPGGAAEKDG RLKANDKIVA VAQDGEDYVD VVEMKLNRVV 
RLIRGMGGTK VKLKVVNAAN ETSEVVLTRQ KIELKAQEVK GEIIPLETRI PGAKGRIGVI 
NIPSFYRDFG GAQAGQDNFK STSRDVAKAL QEFDKQGGVD AVVIDLRMNG GGALTEAIEV 
SGLFIDQGPV VQIKEPNGKI KSYDDEDPGV MYKGPLVVLC NRLSASASEI FAAAIKDYGR 
GIVVGDTTTH GKGTVQHVMP ISNRMFSVLN NQDLGSVKLT INQFYRVNGD STQNRGVPSD 
VVLPSLVDHM DLGESFLENA LAFDQVPKAA HPIYDMTPAN VLAALKEQSA RRIAAEADFD 
KIRNDVTRFD ARKNRKTISL NQETLKKERD EEKAVEEIRK EEEEHETKGT NGPIFKKTPY 
NDEVLKIASE YVTLLRQAKT AKR