Gene Plim_1138 details

Gene Information

• Locus tag: Plim_1138
• ID: 9137825
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 1445204
• End bp: 1447357
• Gene Length: 2154 bp
• Protein Length: 717 aa
• Translation table: 11
• GC content: 54%
• Product: flagellar biosynthesis protein FlhA
• Protein accession: YP_003629172
• Protein GI: 296121394

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.501874
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCGCAC CTCGCGCTCA GAATCTGCGC GACGCCGGGA ATTTCGCGCA GAGTCTGCTC 
ATGCCAGGCC TGTTCGTCAT GTCGATTCTG GTGATCATTG CACCCTTACC ACCCGTGGTG 
CTCGACGTCC TGCTGGCGGG GAACATTACG CTGGCGGTGG TGATTCTGCT GACGACCATT 
TACGTCTCGA AGCCGCTCGA TTTCAGTGTT TTCCCATCAC TATTACTGGG GACAACCCTG 
GCGCGGCTGG TGCTGAACGT GGCCTCGACA CGTTTGATTC TTACACGGGC CAACATCGAT 
GGAACCAGTG CGGCAGGCGA GGTGATTGAA GCCTTTGGCG AGTTTGTTGC CGGCGGACAA 
CTAGTCGTAG GCATCATTCT CTTCGTGATT CTCGTCGTGA TTCAGTTTGT CGTCATCACC 
AAGGGCTCCA GCCGCATCAG CGAAGTGGCG GCTCGCTTTG CTCTGGATGG AATGCCCGGC 
AAGCAGATGG CGATCGATGC TGATCTCAAT GCCGGTGCCA TCACACAAGA GGTGGCCAAA 
GCGCGGCGTC TGGAAATCAC ACAGCAAGCC GACTTTTATG GCGCTATGGA CGGTGCAGGC 
AAGTTTGTCC GTGGCGATGC CATTGCAGGT ATTATCATCA CGCTGATTAA TGTTCTGGGT 
GGAATCATCA TTGGCATGTT CATGCACAGC ATGCCGTTTG AGGAAGCGAT CAAAGTCTAC 
ACAACCTTGA CCATTGGCGA TGGACTGGTT TCCCAGGTAC CGGCCTTTCT CATCTCGCTG 
GCTTCTGGCC TGCTGGTGAC TCGCTCCAGC AGTGAATCAA ATCTTTCCAA AGAAACTCTT 
AGCCAGCTTT TTCGGCACAG CGAGACACTT TTTGTGTCGA GTGCCTTTGT CGGCGCCATG 
GCGTTTACAG GCCTGCCGAT GATGCCTCTG CTTTCATTAA GTTTGGCACT GGCCGTCGCA 
GGCTACTTTC TGCGTTCCTC CCAGGAGAAA GGGAAGCTGC AAAAAGCCCA GGCAGAAACA 
CAAGAAGCAG CCGCAGCGAA ACCGCAGCCT CGTCCGGAAG ATCATCTGGG TGTTGAACCA 
CTGGAAGTCG AACTGGGCTT TGGCCTGATC CGCCTTGCCG ACCCGGCTTC CAATGGAGAT 
CTTCTCGATC GAGTCACGCG AGTCCGCAAT AAGATCGCTC AGGAACTGGG GCTTGTTCTT 
CCCAAGATTC GTATTCGCGA TAATGTTCGC CTGGAACAGA ACGAATATCA GATCAAACTG 
AAAGATACGC CCATTGCCTG GGGTGCCGTT TATCCCACCG GGTTAATGGC CATCGATACC 
GGTTTAACGA CTGGCCGCAT TCCGGGTATG GATGCCCGCG ATCCGGCTTT TGACCGACCT 
GCCGTCTGGA TTGAACCTTC ACAGAATGAA CGCGCCCAAC TGCTGGGCTA CAGCGTTGTG 
GAACCGGCAG CTGTGATCGT CACACATCTG ACAGAGATTG TTCGCTCGTA TGCTGACGAG 
TTACTTTCCC GTCAACAGGT TCATCAACTG ATCGACACAC TCAAAGGCAA AGCCCCCAAA 
CTGCTTGAAG ACCTCGTGCC TGATGTCCTC AAGATCGGTG TGATTCATCA GGTTCTGGCA 
AACCTGCTCC GGGAAAGAAT CCCGATCAAG GATCTGGAAA CCATTCTGGA AACGTTAGGA 
GATTACATCG ATCGCACGAA GGATATTGCC ATTTTGACGG AATACGTGCG ACATTCTTTG 
AGCCGCACCA TCTGTCAGCA ATATCGCGAT TCACAGCGTA CGTTGCATGT CGTGACGTTA 
GAACCTGCCG TCGAAGATAC GTTGTCGGCC GGGATTGAAT TCACCGAACG CGGCATGCTG 
GTCAAGCTCT CGCCTCAGAT CGTGGAGTCG TTTACTCAGG AACTGGCAAA GCAACTGGAA 
AAACTGGTGC AATTTGGCCG GCCACCCGTG CTGTTGTGCG GCCCGCAATT GCGTGCCGGT 
GTGCGACAGA TGACGTCCAG CACCTTACCA CGACTGGCTG TGATCAGTCT GAACGAAATC 
ACGCGGGATA CGGCTGTCGA ACCTCATGGT GTGATCGGTA TTGCTGCCAT CAGACCAGCC 
AGACCCACCA TGATGCCTGC TCCACAGGCC GATTTGACAG GAGCCAGGCG ATGA 

 

Protein sequence

MPAPRAQNLR DAGNFAQSLL MPGLFVMSIL VIIAPLPPVV LDVLLAGNIT LAVVILLTTI 
YVSKPLDFSV FPSLLLGTTL ARLVLNVAST RLILTRANID GTSAAGEVIE AFGEFVAGGQ 
LVVGIILFVI LVVIQFVVIT KGSSRISEVA ARFALDGMPG KQMAIDADLN AGAITQEVAK 
ARRLEITQQA DFYGAMDGAG KFVRGDAIAG IIITLINVLG GIIIGMFMHS MPFEEAIKVY 
TTLTIGDGLV SQVPAFLISL ASGLLVTRSS SESNLSKETL SQLFRHSETL FVSSAFVGAM 
AFTGLPMMPL LSLSLALAVA GYFLRSSQEK GKLQKAQAET QEAAAAKPQP RPEDHLGVEP 
LEVELGFGLI RLADPASNGD LLDRVTRVRN KIAQELGLVL PKIRIRDNVR LEQNEYQIKL 
KDTPIAWGAV YPTGLMAIDT GLTTGRIPGM DARDPAFDRP AVWIEPSQNE RAQLLGYSVV 
EPAAVIVTHL TEIVRSYADE LLSRQQVHQL IDTLKGKAPK LLEDLVPDVL KIGVIHQVLA 
NLLRERIPIK DLETILETLG DYIDRTKDIA ILTEYVRHSL SRTICQQYRD SQRTLHVVTL 
EPAVEDTLSA GIEFTERGML VKLSPQIVES FTQELAKQLE KLVQFGRPPV LLCGPQLRAG 
VRQMTSSTLP RLAVISLNEI TRDTAVEPHG VIGIAAIRPA RPTMMPAPQA DLTGARR