| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1115 |
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| Symbol | |
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| ID | 9137802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 1416871 |
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| End bp | 1417914 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_003629149 |
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| Protein GI | 296121371 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.719605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGATCA GATTTGGTAC GCCCCTCTTG GCGGCCCTGG CCATGGGATT TGGAATTGCA
ACGTTGACTC ATCTCACGCC CAAAGAGCAA CTCACCCCAG CACCCAATCC TCCCACTTCA
TCGACGATTA GCGAAAGCAC GATCTCGGGT CTCGGAGAGG TTCAGATGGC AGGAGAACCC
ATCGCGATCG CCACCCCGCT CTCTGGAATT GTCACCCGCG TACACGTGGT CACTGGCCAG
TCAGTTCGAG CCGGAGATCC TTTGTTCACA CTCGACGATC GCGCACTCAC TGGCGAACTC
AATTTTCGCA AGGCGACACT GGCCACCGCC CAGGCGAAAC TGGGCAAATT AGAAGCAGGC
ACGCGGCCAG AAGATTTTCC ATCAAGCCGC GCCAAGGTCG AAGCCATGAC GGCATTATTC
AAACGAAGTG AAGACGCATG GAATCGCGCT AAACTCTTGA TTGACAAACG GGCCTTGAGC
GAAGAAGAGC AGAATGCTCG TCGCTATCTG TACGAACAGT CCGCCGCAGA ACTGTCTCAA
GCAAAAGCCG ATCTGGCAAA ACTCGAAGCG GGGACATGGA AACACGATCT CGAAATCGCC
CAGCGCGAAG TGGAGGCTGC AGCCGCCAGT CTGGCGATGA TACAGATCGA TCTCGATCGT
TTGGTGATTC GTGCCCCTGT TGATGGTCTC GTGCTTCACG CAGACGTCCG GCCCGGAGAA
TTTGCCGAAG CAGGGAATCG CGACAAACCG CTGATCCAGC TTGGGCAGCA CGGACCACTT
CGAGTTCGCG TGCAAATCGA TGAAGAAGAT GCCATCAGGG TCAAAGCCAA TTCGAAAGCC
GAAGCATTTG TTCGCGGAAG GGACAGAACG GCCGTCAAAC TTCAATTCGT CCGCATCGAT
CCGCGGATCG TTCCCAAAAG TTCGCTGACC GGCGGCACAA CAGAACGGGT AGATACCCGC
GTCCTCTTTG TAGTTTATGA AGTCGTTGAA AACCCCACCC GGATCTACGC TGGCCAGAAA
CTCGACGTTT TTATGGAGGG CTAA
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| Protein sequence | MLIRFGTPLL AALAMGFGIA TLTHLTPKEQ LTPAPNPPTS STISESTISG LGEVQMAGEP
IAIATPLSGI VTRVHVVTGQ SVRAGDPLFT LDDRALTGEL NFRKATLATA QAKLGKLEAG
TRPEDFPSSR AKVEAMTALF KRSEDAWNRA KLLIDKRALS EEEQNARRYL YEQSAAELSQ
AKADLAKLEA GTWKHDLEIA QREVEAAAAS LAMIQIDLDR LVIRAPVDGL VLHADVRPGE
FAEAGNRDKP LIQLGQHGPL RVRVQIDEED AIRVKANSKA EAFVRGRDRT AVKLQFVRID
PRIVPKSSLT GGTTERVDTR VLFVVYEVVE NPTRIYAGQK LDVFMEG
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