| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_1030 |
|---|
| Symbol | |
|---|
| ID | 9137716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 1299404 |
|---|
| End bp | 1299886 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF55 |
|---|
| Protein accession | YP_003629072 |
|---|
| Protein GI | 296121294 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATC CGGTTCGCTA CTGGCTCTTT AAATCCGAGC CAAGTGCATT TTCGATTGAT
GATCTGGCGG CGTCTCCCAA GCAGACGGCC CTGTGGGATG GCGTCCGTAA TTATCAGGCG
AGAAATTTTC TGCGTGATGA TGTGCAGACA GGCGATCTGG TCTTTTTTTA CCACAGTCGA
GAAGAGCCGC TGGGGATCGT GGGAACCATG AAAGTTGTGC GTGCGGGTTA TCCCGATCCC
ACGCAATTCA ACCCCGCCAG CAAGTATTAC GATGCGAAAA GTCCGCCCGA TGCTCCGCGC
TGGATTGGTG TTGATGTCCA ATTGATGCAG AAGTTTCCTG CCGTCGTTAC TCGCGATCAA
TTAGCCGCCC ATCCCAAGAC CGCCAGTATG CTGGTGATGA AACGTGGCAT GAGATTATCG
ATTCAACCTG TCACGCGGAG TGAATGGTTA CATGTGCATC AACTGGCAGG AGTTCGCCAG
TGA
|
|---|
| Protein sequence | MADPVRYWLF KSEPSAFSID DLAASPKQTA LWDGVRNYQA RNFLRDDVQT GDLVFFYHSR
EEPLGIVGTM KVVRAGYPDP TQFNPASKYY DAKSPPDAPR WIGVDVQLMQ KFPAVVTRDQ
LAAHPKTASM LVMKRGMRLS IQPVTRSEWL HVHQLAGVRQ
|
|---|
| |