Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_1016 |
Symbol | |
ID | 9137702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 1284004 |
End bp | 1285143 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | peptidase M56 BlaR1 |
Protein accession | YP_003629058 |
Protein GI | 296121280 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.196488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTCAG CTCAATTTCT GGAATTTCTA GTCTCGCTTT CCATTCAGGC CACAGTAGTT GTCGGTATTA CGGAATGGCT TTGTCGCGTT TCCCGATGGC CACAGGCACA ATACAAGCTC TGGAATTATT GCAATCTCCT GCTTCTATTG ATGACTGGCT GTGGTTTGCT ACTGCCTCAT TTGCGAGTGC TGACGAATCC ATGGCAAGTC ATGAGTCCAG CGGCCTTGCA GCAACTGGTC TCTGTTGAAC AATCGCTTGG TCAGCTGGCT CTCGTCATCT GGGGGACAGG AATACTCTTG TCGTTCATCA TGCTCGCCTC GGAGTGGATG ATGGTGGCGA GGTTTCTCAA GTCGTGCCGG CCGGCGACAG AGAGTGAAGT GAAACTGGTT TTTCACGACC CAGCTAACAA TTTGACCAGT CGAATCCTGC AACCGAATGC TTCGATTCAA CTGTTGATCA GCCAGCGTTT CAACAGCCCG TTCTGTTATC AATGGCATGC ACCAGTTCTC GTGCTGCCAG AATATTTACT GAGCCTGCCT CAAGACGAAA CCACTTTCAT CACCCGCCAC GAACTCTCCC ATTTACGCAG TGGTCATCCA CTGCAGTTAT TTATTGAGCG TCTGGTAATG ACATTATTCT GGTTTCATCC GGCGATCTGG TGGGCTTCAC GGCAATCGAT GCTAGCCAGG GAATATGCCT GCGATGATGC GGCCATTTCC GCGCGGTATG AAGTTGTGGG ATATCTCAAA ACATTACTCG CTGTGGCGGA ACGGGGATTT CATAAAGAGC CTGAAGGATC GGCTCTATAC TTCGGCAGCG GTAGTAACAT GATGGCGTTG CGGGGGCGAA GAATACTGGA CCGCTTTGAG TCAGCAGCAG AGTGGTCGCA GCCAGATCAA CGTGCCAGGT GGTGGCCATT CCATCTGCTG ACGGCTATGG CCATTGTCAC CTGGTCTTTC TGGTTGCCCG TCGATGCACT GGCTTCATCG CGAATGCAGT GGTCTCCGTG GCCTGGATGG TCAGCCGCTG TTCTGCGAAC GATCGATATC CCCGCCCGGG ATTATGAACC TTATGACCGG ACGACTCGCC TGCATGAACT GTCGCTGGAG TTCAGCCAGC CTCATGCTTC GTCGCAATAA
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Protein sequence | MNSAQFLEFL VSLSIQATVV VGITEWLCRV SRWPQAQYKL WNYCNLLLLL MTGCGLLLPH LRVLTNPWQV MSPAALQQLV SVEQSLGQLA LVIWGTGILL SFIMLASEWM MVARFLKSCR PATESEVKLV FHDPANNLTS RILQPNASIQ LLISQRFNSP FCYQWHAPVL VLPEYLLSLP QDETTFITRH ELSHLRSGHP LQLFIERLVM TLFWFHPAIW WASRQSMLAR EYACDDAAIS ARYEVVGYLK TLLAVAERGF HKEPEGSALY FGSGSNMMAL RGRRILDRFE SAAEWSQPDQ RARWWPFHLL TAMAIVTWSF WLPVDALASS RMQWSPWPGW SAAVLRTIDI PARDYEPYDR TTRLHELSLE FSQPHASSQ
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