Gene Plim_1002 details

Gene Information

• Locus tag: Plim_1002
• ID: 9137688
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 1267815
• End bp: 1269917
• Gene Length: 2103 bp
• Protein Length: 700 aa
• Translation table: 11
• GC content: 60%
• Product: protein of unknown function DUF214
• Protein accession: YP_003629044
• Protein GI: 296121266

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.95364
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGCGGC GCTGGCAGTT TTACTTACGA CTCGGCTGGC TTGATCTGGT TCGCTTGTGG 
CCGACAACTA GGCATCACGC CATCATTGTC GCCGGAATCT GCCTGCCGAT TCTCATGTTG 
CTGGGAATCA AACGCGGGCA TGTAGCCGAA TTGCGTCGCG ATCTCGTGAC CAGTCCGATC 
GGACGGCAGG TCACCTTCTG GTCGGCTCGC AAGGGCGAGC TGATGGATCG TACTGCCGTT 
GCCCGTCTCA GTAGTGAGCT GCCATCAGTC GAAGTCATCA TTCCCGAAAT TCAGCGTGTC 
GTCAGATTAT CTCGGACTGA GTCGATCTCT TCCGCTTCAT CGCCAAACGA GGAAATGGGC 
ATTTCCGCCA CACTCTATGC CACCCGCCCG GGCGATCCGA TGCTGGCTCA ACTCGGGATA 
GCAGCACCTG CGGCAGGTGA GCGCTCGATT GTGCTGGGAG AAGGACTGGC CCGGCGGCTG 
CAAGTCGGCG CAGGTCAACA GGTCGATCTC CATCTGACGC GCGGTCGCGA TCATCAGGAA 
GAACAAGTCT CACTGACCTG TACCATCCTG GCTGTGATGC CCACCGAGCA ACAGGATGCC 
GCCATCGGCT ACCTCGACCT CGACCTGCTC GACGCCTGCG AGCAGTTCGT GCGCGGTCAA 
CGGGTGGAGT CCTTGAACTG GCCCAGCGCC CGCACTCCGG CACGCGACGG CTATTCGAGC 
TACCTCATCT TCTGCGAACG CGAGAACGAC CTGACAGAAG ACGATCGCAA GTTTCTCGCC 
GATCGAGGCT TCTTATTGAC AGATCGAACG GCTGAACCAC CCACTCCGCT CGACAGGTTG 
CTCGCACCCG GCTCGCGAGA AGAGCTGCGG ATCTATGAAG CTGCGACGAC TCAAACCAGC 
CAGCGCCCAG AACCGCGTCT ATTCTTTGCA CCATCTGAAC TCAGTGAACA GACGACTGCC 
GACGATGTCA TCCTCCCTTG GAACCCACCC GCCAGTGCCG AACACGAAGG TCGCCCATGG 
ATATTAGCCG GTCTCTCTCT GCCACGAAGA ACATGGCTGC GTGAGTACTT CGTTCAGGCC 
GATTTGCCCT TCGATTACGA TGCCGAACCG TTTCAGGCGC GGACACTCGC ACCGCTGGAA 
CCGATCTCGC TGGTCTGCCT GCTCGACGCG AAGCAACGTC TCGCCATTCC CTGCGTTGGT 
AGAAATAGCT CTTCTTCGGA AACACTCACA TCACCCGCTG AGTCTCCCTC GGACGCATCA 
CCTCCCGGCG ATTCCTCAAC CGAACCAATC GCTCCCGCCA GTGACCTGAA TCCTGCCAGT 
GCCCTCGCTC CCGCCAGTGC TCTCGCTCCC GCCAGTGCTC TCGCTCCCGC CAGTGCCCTC 
ACTCCCGACA ATATCACGAC AAACAATCGC CAGGCCTCTC CCGGTTTACC CGACATTGCC 
ATCGTACCAG CGAACCTTAC CGCGTGGCTC GCGGCTTATC GCGCCAGCAT GGCCGTCTAC 
GACCCGACGA TTCAACTCTT TGTACCGTTG CCACAGTCAC CTGTGTACGA CCGCGCCCGG 
CTTTACGCCC GCACCATCGA CGATGTCCCC GCCGTGGTCT CGGCGCTCTC GAACCAGCAG 
TTTGCCGTCA TGTCCGAGAC AGGCCGCATT GCCGAGATTC ATCGCCAGGA CCGTTCCCTG 
CAACTGCTGG TGTGGGTGGT CGGCATTGGA GTCTTCCTGT TCGGCATCGT GACTGTCGTC 
AGCGTGTTGA TGGATTCGAC CGACCGCAAG CGAGGCACAA TCGGCATTCT GCGTGTGATG 
GGTGTCTCAC CTTGCGGCAT CTTTGTGTCG ATCCTGCTCC GATCAGCCAT GATCGGTCTC 
TTCGCTGCCG CCTTAAGTCT GGCCTGTGGC GTGGGATTGG CCATAGCTCT TGAATGGCAA 
CCCGCTTCGA CAGCCCACTG GTTGAGCTGG AAACCGGTCG TCCATATTGA GTTGCATCCC 
TGGGACATGG CCATTGTCGC AGCCGGTGCA TTGCTCTGTT GTGGCCTTGG TTCGCTTCCT 
CCCGCGTGGC GAGCCAGCCG TCTCGATCCA TTCGATGCCA TCGTCGAAGG TCGCTTTCGT 
TGA 

 

Protein sequence

MMRRWQFYLR LGWLDLVRLW PTTRHHAIIV AGICLPILML LGIKRGHVAE LRRDLVTSPI 
GRQVTFWSAR KGELMDRTAV ARLSSELPSV EVIIPEIQRV VRLSRTESIS SASSPNEEMG 
ISATLYATRP GDPMLAQLGI AAPAAGERSI VLGEGLARRL QVGAGQQVDL HLTRGRDHQE 
EQVSLTCTIL AVMPTEQQDA AIGYLDLDLL DACEQFVRGQ RVESLNWPSA RTPARDGYSS 
YLIFCEREND LTEDDRKFLA DRGFLLTDRT AEPPTPLDRL LAPGSREELR IYEAATTQTS 
QRPEPRLFFA PSELSEQTTA DDVILPWNPP ASAEHEGRPW ILAGLSLPRR TWLREYFVQA 
DLPFDYDAEP FQARTLAPLE PISLVCLLDA KQRLAIPCVG RNSSSSETLT SPAESPSDAS 
PPGDSSTEPI APASDLNPAS ALAPASALAP ASALAPASAL TPDNITTNNR QASPGLPDIA 
IVPANLTAWL AAYRASMAVY DPTIQLFVPL PQSPVYDRAR LYARTIDDVP AVVSALSNQQ 
FAVMSETGRI AEIHRQDRSL QLLVWVVGIG VFLFGIVTVV SVLMDSTDRK RGTIGILRVM 
GVSPCGIFVS ILLRSAMIGL FAAALSLACG VGLAIALEWQ PASTAHWLSW KPVVHIELHP 
WDMAIVAAGA LLCCGLGSLP PAWRASRLDP FDAIVEGRFR