| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0866 |
|---|
| Symbol | |
|---|
| ID | 9137551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 1111547 |
|---|
| End bp | 1114609 |
|---|
| Gene Length | 3063 bp |
|---|
| Protein Length | 1020 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | FAD linked oxidase domain protein |
|---|
| Protein accession | YP_003628909 |
|---|
| Protein GI | 296121131 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAATCT GGGCGACTCG AATCAAGGAA GACCTCTCCG GTTTGTTTCG GGGCAAGCTC
GATGTGAGCC GGGTGGCATC GATTGTTTAC TCCCAGGATG GAGGTGTCAC TCGTGAGGCT
CCCTGTGGAG TCGCGCTGCC AGAAGATGCT GAAGATCTGG TCGTGCTGGT GCAGTATTGC
CATGAGCACA GCATTCCGAT GACTGTGCGA GGTGCTGGAA CTTCGCTCTT TGGCCAGTCT
CTGGGCCCGG GTTTGATCAT TGATGTTTCG GCCAGCATGA ACCGTGTGCT CTCCCTGAGT
GAGCGCACTG TCCGCGTTGA GCCGGGAATC ACCATTGACG AACTGAACCG CCGCTTAAGG
CCTTATGGCC GCGAGTTCGG GGTCTATCCT CTGGATTCTG CCGTAGCGAC CGTGGGCGGA
ATTGTCGGAG TAGACGGTAT CGGGCCACAC GGCTTACGTC ATGGAGCAGC CCACGACCAT
GTCGCCTCAT TGCAGGTCAT GCTGGCCAGA GGGACGCAGT TTACGGCGGG ACTGGAACCC
TTAGCCATGC CTGATCGGAA GGCCACGGAA AATGAGCCCC ATCAGGTCAA ACGAACCATC
ATCTGCCGGC TCGAATCGAT CTTGAGAAAT GAGGCCGCCC TGATCAAGGC GTCTCAACCG
GGAGTCACTC TGCTGCGCCG GGGTGGCTAT CAATTACGGG GAGTTCTGAC CGAAGAGCGG
CTCGATTTGT GCCGCCTGCT GGTCGGTTCC GAAGGCACCT TGGGTTTGTA TACAGGGATC
ACGCTGCATA CGACCCCATT GCCAGCCCAT CGAGGCGTTC TGCTGTTACT TTGCCCGACA
CTCGATTCAG CCATTGAAGT GGTGCATCAG GTTCGAGTGA TGGAGCCTGC AGCATGCGAT
TTGGTCGATC GCAGAATCCT GACTCTGGCA AGAGAGCTCG ATGACCGGTT TCTGATGATT
ATTCCTCCGA CCATTGAAGC TGCGGTGCTG ATTGAAGTCA CAGCCGAGAC GGAATCGGAG
TGTCGCGAAC AGTTGACCAG CCTCAGACGC TGCACCGCAC GCATTGCGGA AGGGCATTTA
ACGGCCTATG AAGCGAATTC ACCCAGTGAT GTCGAGTTTC TCTGGTCGCT TTCTCGTAAA
ATCCTTCCCC AACTGGAAAA GCCTCGTGGT GGCGTACGGA CTGTGCGGAT CTTTGATGAT
CTGGTCGTTC CTCCAGAAGC ACTCGCGGAG TTTCTGGCAA AAGCCCACAA AGCTTTTCAA
ACGGCCGATA TCTCGGCGGT CATGTATTCG CATGCTGCCA TGGGTGTGGT GCACTTTCGA
CCCTTACTGA CAGATCGAGC AACCTGGCCT GTTGCTGCTT TAGAGCAGTT GCAGTATGCG
TTGTATGAAG CCGCCTGGTC TCTGGGTGGC TGTATCGGCA GTACTCAAGG CCTGGGCAGC
CTGCGGACGA GCGCGCTGCG AGAGCAGTAT GGTTCGTTGT GCGATATCTT CAAAGAGGTC
AAAAACATCT TTGATCCCGA AGGATTACTG GCTCCCGGAC ATGTTGTCCC TGCCGCAGCG
CGAGTCGGTT GGGGAACGGC TTTTCCCTCT GCCAATCAGC AGGCAAAAGC TGTGGAACCC
ATTCACTTTT CTGGTCGGGA ATTGAAGTCG ACTTTTGAGC AGGAGCTGCC GGCTCAAGCT
CCTACCGGCG AACTGGTGGA GTTATGCCAC TCGTGGCCCC AGGGAGAAGC GATTGAGTCC
GTCAATGCCT GCAACGGCTG CGGAAATTGC CGTCGTGAAG ATCGCAATCA CCGGATGTGC
CCGTTCTTTC ATGTGACTCA TCAGGAGGTC TCCAGTCCAC GAGCCAAAGC TGTGGTGTTT
CGAGATATTC TTTCCGGCAG ACTTTCGCCA GAGACGCTGA CTCGCCCGGA AATGCTTCCT
ATTCTCAATT CGTGCTTTAA CTGCCAGCAA TGTTCTCTCG AATGCCCTTC TCATGTTGAT
ATCCCGCGAA TGGCCATCGA ATTGAAAGGT CAGGCGGCAG CTCAACAGGG TGTTTCCCGA
GTCGATTGGC TCCTTTCGCG GCCTGATGTC TGGGGGCCAT GGGGCAGTTG GTTAGCACCA
GTCCTCAACC CATTGCTCAA CTGGGGCACA TTTCGCCGGG TTCTGGAATT GCTGACTGGA
GTCGCCCGAG AGCGGCGATT ACCACTTTTT TCTCGAAAGT CTTTTCTCCA GCAAACCGCC
CAACAAGCCG TTGATGTTCC GCGATCTGCA TCTGAGCCCG TCGCAGGTCA GAAAAAGCCA
CTTCAGCCAG TGGTTTACTT TGTCGATCAT TTTGCAAACT ACCACGACAC GGAACTGGCG
ATGGCATTCA GCCGAGTGCT GGAGCATCTG GGGTTTGAGC TCATTGTGCC GAAGGGACAA
TTGGCCTCCG GGATGGCCTT GATCTCCGCT GGTGAGTTGC CAGCGGCACG TGAACTGGCA
CTGGAAAATC TGCGAGTGCT GGCCCCTCAC GCTCGTGACG GGTTACGCAT CATCTGTACT
GAGCCAACGG CGGCTTTGTG TTTGAAGAAA GAATATCCCA GGCTGACTCA ACATCCGGAT
GCCGAACTGG TGGCACAACA GACCGTGGAA GCGGGGGCAT TTTTAGCAGA ATTAGCGGCA
CAGGGGCGCT TACCCATACC GACAGAGCCT CTCGCGATGA CCCCCATGCG GGCGGTTTAT
CATACTCCCT GCCATTTGAA ATCACTCGGC GAAAGACAGC CTCTTCTGGA GATCTGCCGG
CTGATTCCCA AGCTGGAACT GCATGCCGTC GAACGGGGAT GTTCGGGCAT GGCTGGCACC
TTTGGGCTGT CGAGCAAACA TTTCCAGACC TCGATGAAAA TCGGCCATGA ACTCATGGAA
ACCATGCGAT CCCGGGACTG GGATTTTGGC GTGACTGAAT GCAGTGGCTG TCGTTTGCAG
ATGACCCAGC GCACCGCCAC GCCGACATTA CATCCCATCA AACTGATGGC GATGGCTTAT
GGTCTCATGC CGGAACTCAA GGTCCGGTTC AAGCACCAGA CCAGAAAATA TACTCTCGAA
TGA
|
|---|
| Protein sequence | MEIWATRIKE DLSGLFRGKL DVSRVASIVY SQDGGVTREA PCGVALPEDA EDLVVLVQYC
HEHSIPMTVR GAGTSLFGQS LGPGLIIDVS ASMNRVLSLS ERTVRVEPGI TIDELNRRLR
PYGREFGVYP LDSAVATVGG IVGVDGIGPH GLRHGAAHDH VASLQVMLAR GTQFTAGLEP
LAMPDRKATE NEPHQVKRTI ICRLESILRN EAALIKASQP GVTLLRRGGY QLRGVLTEER
LDLCRLLVGS EGTLGLYTGI TLHTTPLPAH RGVLLLLCPT LDSAIEVVHQ VRVMEPAACD
LVDRRILTLA RELDDRFLMI IPPTIEAAVL IEVTAETESE CREQLTSLRR CTARIAEGHL
TAYEANSPSD VEFLWSLSRK ILPQLEKPRG GVRTVRIFDD LVVPPEALAE FLAKAHKAFQ
TADISAVMYS HAAMGVVHFR PLLTDRATWP VAALEQLQYA LYEAAWSLGG CIGSTQGLGS
LRTSALREQY GSLCDIFKEV KNIFDPEGLL APGHVVPAAA RVGWGTAFPS ANQQAKAVEP
IHFSGRELKS TFEQELPAQA PTGELVELCH SWPQGEAIES VNACNGCGNC RREDRNHRMC
PFFHVTHQEV SSPRAKAVVF RDILSGRLSP ETLTRPEMLP ILNSCFNCQQ CSLECPSHVD
IPRMAIELKG QAAAQQGVSR VDWLLSRPDV WGPWGSWLAP VLNPLLNWGT FRRVLELLTG
VARERRLPLF SRKSFLQQTA QQAVDVPRSA SEPVAGQKKP LQPVVYFVDH FANYHDTELA
MAFSRVLEHL GFELIVPKGQ LASGMALISA GELPAARELA LENLRVLAPH ARDGLRIICT
EPTAALCLKK EYPRLTQHPD AELVAQQTVE AGAFLAELAA QGRLPIPTEP LAMTPMRAVY
HTPCHLKSLG ERQPLLEICR LIPKLELHAV ERGCSGMAGT FGLSSKHFQT SMKIGHELME
TMRSRDWDFG VTECSGCRLQ MTQRTATPTL HPIKLMAMAY GLMPELKVRF KHQTRKYTLE
|
|---|
| |