| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0782 |
|---|
| Symbol | |
|---|
| ID | 9137465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 1016664 |
|---|
| End bp | 1018208 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003628826 |
|---|
| Protein GI | 296121048 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.84486 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGTCT TACCTATGTT GTCATTTGTC ACAGCCGCCG GTCTGGGTGT CATGTGGTGG
GCCTCCGAGA ATGACATTCG TCTTCCCGAT GGGATCTCCA CACCACTTCT TGTCTCACAG
GCCACCATCC CCGAAGATCC TCCCGGGACT CCACCTGCCC GGCTAACGTT GGCAGATGCT
CGCCCTCTGG CTTCAACAAG CTCTTCATCA ACCGTTCCGA GTGCATCAAC CACTCTCAAG
AGGACGAAAT CGTCGTCGGC CATCGAGATG GAACTGGCGA CCGATTCTCC GTCGGTCAGC
CTGGGTGAAT CCGAACCCAT TCTGATGGCG CTGTCCAAGC CATTACCGGC CGAATCGGAA
CTGCACTCTG TCTTTTCAGA TCCCGCAGCG GCTCCTTATT CGCCATCTTC CAAACCATCG
ACGCGTCCCA AGACAAAGTC GGCACCTCGT CGTTTCTCCA GTCAGCCGGC TGATTCCACA
GCCGGTGAAG CGGCTTCCAA TTCTCCCGCA ACCTTCGGTG ATTCGATTGA AGCCACTGAG
CAAGCCACTG AGCAAACAAT CGAAACAGAA AAGCCGGTTG TCACTCAGAA GCAGAGTACG
CCAGCGACCA GAGAATCAGA AACGGTGACC AGACCGGTTT CAGACGAAGA GAAGCTTCTG
GGACGCTGGG AAATTGCCTA CCAGTCGACC GATGGTTTGC CGATTTACAT TCGCACGATG
GGCCGAGGGA AGTTTTCGAC ACTGGTGGTG GCTGGCCTGG AAGGGACAGA TCGTGTCTCT
GTGCGCTGGG CCGACAAGCT GGTGACTTCT ATTTCCAAGA ATCCGAATAT CCTTAATTCT
TCGACAATCA CGATTGTTCG TGCTGCGAAC CCGGATGGTT TGCAGGCTAA CCGGAGAACC
AACTCACGAG ATGTTGATCT CAATCGAAAT TTCCCGACAG CGAACTTCTC GCGCGGCCAG
ACCAAGCGCA GTGGCGAAGC GCCAGCCAGT GAAATCGAAA CTCGGGCAAT TCTTCAGACG
ATTGCCACAC ATCAGCCCAA CCGAGTAGTC ATTCTGCGTT CGACACCGAC ACGCAACGGA
GAAGTCATTC ATTCGATGAA TGCCAAAAAC ATTGCCAACC AACTGATGAC CACTTCGCGG
TGGACTCCTC AACTCCTGCT CTCTCCCGAT TGGCCTGGCT CGCTGGAAGT GCTGGCTGAC
GAAACGGTTG CTGCTCAGGT CCTCTCACTC AGTCTGCCTT ATGGGCAGGA TCCGATGGTG
GAGTTTGATC GGCATGTCAA CGGGCTGATG ATTGCCATTT CGGATCAGGC CGGAGAGAGC
CTATCCCCCA TGGCTCGTAA ACAGAATTAT CAGCAGCTTG AAAATCTGAT GGCTCAAAGT
GCCAGATCGC GAGTGGCTCC TGCAGATCCT GTTGAGGCAC CAAACCTGGA TAAATATAAA
CTGAAACAAG GCGGGATTCC GACATCCAGT CCACAAGGCC CAGCTCCTGT GGGTAAGCCG
CGAGGCTATC AGGAGCTTCC ACCGCCACCA CCATCGAAAA CCTGA
|
|---|
| Protein sequence | MKVLPMLSFV TAAGLGVMWW ASENDIRLPD GISTPLLVSQ ATIPEDPPGT PPARLTLADA
RPLASTSSSS TVPSASTTLK RTKSSSAIEM ELATDSPSVS LGESEPILMA LSKPLPAESE
LHSVFSDPAA APYSPSSKPS TRPKTKSAPR RFSSQPADST AGEAASNSPA TFGDSIEATE
QATEQTIETE KPVVTQKQST PATRESETVT RPVSDEEKLL GRWEIAYQST DGLPIYIRTM
GRGKFSTLVV AGLEGTDRVS VRWADKLVTS ISKNPNILNS STITIVRAAN PDGLQANRRT
NSRDVDLNRN FPTANFSRGQ TKRSGEAPAS EIETRAILQT IATHQPNRVV ILRSTPTRNG
EVIHSMNAKN IANQLMTTSR WTPQLLLSPD WPGSLEVLAD ETVAAQVLSL SLPYGQDPMV
EFDRHVNGLM IAISDQAGES LSPMARKQNY QQLENLMAQS ARSRVAPADP VEAPNLDKYK
LKQGGIPTSS PQGPAPVGKP RGYQELPPPP PSKT
|
|---|
| |