Gene Plim_0736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0736 
Symbol 
ID9137419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp957943 
End bp959430 
Gene Length1488 bp 
Protein Length495 aa 
Translation table11 
GC content55% 
IMG OID 
Productsodium/hydrogen exchanger 
Protein accessionYP_003628781 
Protein GI296121003 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.67035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATTC CATCCAGCGA TCCTCCGGCT CACAGCGCGT TAAAGATCAA CGTGTGGAAA 
TTCTGGGCCA CCTATCTGGT CACGATTGTC GTCGCCATCT TCATTGTGGT CATCATCTGC
CAGTCTGGCG AACAGCTGCT GGTGAATCGC AGTCATTCCG TCAACAGTAT CGCCGACGAA
CCTCAGGACT CAACCACAGC CAAACCTCAG GGACATGCCG TTCATCTGGT GGCACAACTC
ATGTTTGCCA TGGCCGCGGT CTTAATTGTC GGTCGCTGCC TGGGTCAGGT GTGCCACCGG
CTGAATCAAC CGGCTGTGAT TGGTGAAGTT CTTGCCGGGA TTGCCCTGGG CCCATCGCTG
CTTGGAGCCA CTTTCCCGCA AGCCACAGCC ACGCTCTTTC CTGACACCGT GATGCCGGCT
CTCAGTGTGA TTGCCCAGTT GGGGGTGATC CTGTACATGC TGAACGTGGG CCTGGAGTTC
GACATCTCGG CACTTCGTTC GAAAGGCCAT CAGTCCCTTG CCATATCTCA TGGAAGTATC
ATTTTCCCCA TGATTCTCGG CTGCATGGCT GCGATTGCCC TTTATCCGTC ACTGGCTGGC
GAAGCTGCCA GTTTTACCCC CTTTGTTCTA TTCGTGGGTG TCAGCCTTTC GATTACGGCT
TTTCCTGTGC TGGCTCGTAT TCTCGCCGAT CGCGGGATGT CACAGACTCC GCTGGGTGTC
ATGGCACTCA CTTGTGCCGC TGCGGACGAT GTGACCGCCT GGTGCCTGCT AGCGATTGTC
ATCGGAATCG TCCAATCGAC TGCGGCCGAT GCCATCAGGG TTGTCAGCTG TGCTGTCATG
TACTGCCTGT TCATGCTGCT GGCCTTTAAA CCCTTGTTAA CCCGCATCAC GACATCCTCC
ACTGTGGCCG GGATCCAGAA TTCTGGCGGC GAAGAAATGG GTGAAAGCCG CAGTTCAAGC
CAGGTGATCT TCCTGCTGGC TTTGGGACTC ATCTCGGCTG GAATCACTGA TTTGATCGGG
ATTCATGCAC TTTTTGGTGC GTTTTTTTTC GGTGCACTGA TCTCGCACCA ATCGGCCGCA
GGGAAGGGAC TTGCCAGTTT GCTCAACTCC TTCGCACCCG TCATGCTCCC CGCGTTTTTT
GCCATCACGG GTTTGCGCAC ACAAATCGGT CTGCTCTCCT CCTTCACTGA TATGCTTATC
TGCCTGACGC TCATCGCAAT GGCAATTCTT GGAAAATTCG GCGGCAGCTA TCTTGCGGCA
CGTTGGTCGA ACGTATCGCA CTTCGATGCA TTGCGCATTG GCTCGCTGAT GAACACCCGC
GGGTTGATGG AGTTGATCGT CTTGAATCTC GGCCTCGATC TGGGTGTTCT CTCTCCCAAA
CTGTTCACGA TGCTGGTCAT TATGGCCATT GTCACCACGA TGATGACCGG CCCCTGGCTC
GCATGGATCG ACCGGAAAGA AAAATCCAGT CCGCCATCCC TCAATTGA
 
Protein sequence
MEIPSSDPPA HSALKINVWK FWATYLVTIV VAIFIVVIIC QSGEQLLVNR SHSVNSIADE 
PQDSTTAKPQ GHAVHLVAQL MFAMAAVLIV GRCLGQVCHR LNQPAVIGEV LAGIALGPSL
LGATFPQATA TLFPDTVMPA LSVIAQLGVI LYMLNVGLEF DISALRSKGH QSLAISHGSI
IFPMILGCMA AIALYPSLAG EAASFTPFVL FVGVSLSITA FPVLARILAD RGMSQTPLGV
MALTCAAADD VTAWCLLAIV IGIVQSTAAD AIRVVSCAVM YCLFMLLAFK PLLTRITTSS
TVAGIQNSGG EEMGESRSSS QVIFLLALGL ISAGITDLIG IHALFGAFFF GALISHQSAA
GKGLASLLNS FAPVMLPAFF AITGLRTQIG LLSSFTDMLI CLTLIAMAIL GKFGGSYLAA
RWSNVSHFDA LRIGSLMNTR GLMELIVLNL GLDLGVLSPK LFTMLVIMAI VTTMMTGPWL
AWIDRKEKSS PPSLN