Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0681 |
Symbol | |
ID | 9137362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 890489 |
End bp | 892144 |
Gene Length | 1656 bp |
Protein Length | 551 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | UDP-N-acetylmuramyl-tripeptide synthetase |
Protein accession | YP_003628727 |
Protein GI | 296120949 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.170684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACCAC AGCATGCTCT CCCGGCATCA CTGAGTCTGA AAGATCATCT ACCGACCGCA GAGTTAATGG GGGCGGGTGA CATCTACTTC AACGATGTCA CACTCGACAG TCGTGAGTGT CGCCCGAAAA CATTGTTTGT GGCTGCACCA GGTCGAAATA GTCATGGCAG CCAGTTTCTC GAAGAGGCCA TTTCCCGCGG CGCTGTGGGA GTGGTGACTT CTCAAGTCTT ACCGAATTGC CCGCTTCCCC AGTGTGTCGT GGCGAATCCT CGGGCGGCTT ATGCTTATCT CTCGCAATCG CTGTACGGTC ATCCCGCCAG CCGCCTGAGA ATGATGGGAG TCACGGGGAC CAATGGAAAA ACGACAGTCA GTTGGATGAC GAGAGCGCTG ATGGCCAAAT CCGGGTATCG GACGGGCTTA TTGGGAACCG TGGAATACTT TGATGGTTAT CGTGCAGAGC CCTCGGTATT GACGACTCCT GATGCGAAAT TGATGGCTTT CTGGCAGCAT CGCATGGTCA GCCGGGGGAC AACTCATCTG GCCATGGAAC TTTCGAGTCA CTCTCTGGAT CAATCGCGAG CCGCAGCGTT ACCACTTGAT TGTGCAATTG TTACCAATAT CACGCACGAT CATCTCGATT ATCATGGTGA TTTTGCCAGT TATCGCGAAG CCAAAGCCCG GATTCTGGAT CTCGTTAAGC CAGGCGGAAC CATCGCATTG CATATCAACG ACCCGGGAGC CGCCTCGCTG GCGAGTCTGG TGCCTGCGGA ATGCCGTCTG ATTCGCTATG GCGTGAATGT CGATGCCGAG CTCTCGGCTC AGATTCTGAG TGAATCCTTA AGCGGGACGA CATTCCGTGT GCAGTACCAG GGCCAGGTGA TGCAGATGAA GCTGCGGATT CTGGGGCGGC ACAACATCGA GAACGCACTG GCAGCTTTAG CTGCCGGGCT GGCCTGGAAA GTTCCCTTTT TATCGATGGC AGAAGCCTTG GAAGAGTTTC GGCCAGTGCC GGGAAGAATG GAACGCTGCA CTTGGGGTGA ACCGTTTGAT ATTTTTGTGG ATTACGCTCA CACCCCTGAT GCATTGAGCA GAGCGTTATG TTCGCTGCGC GGGCTGACGA GAGGCCGGTT GATTTGTGTC TTTGGGGCTG GCGGAGATCG CGATGCCACC AAACGGCCAC TGCTGGGTCG TGCTGCCAGC CAGGCCGATG TCGCCATCGT TACCAGTGAT AATCCGCGAT CAGAAAACCC CGAAAAGATC ATTCAGCAGA TTTGTGATGG GGTGCCTGCT CAACAAGTCG AAGTCGTGAT TGAAGTCGAC CGAAAGCTGG CAATTCAACA TGCCATTGAG CAGGCGTTGC CCGGTGACAT GATACTGATT GCCGGGAAGG GACATGAGAG CGAGCAGATT ATCGGAGCCA GTCATCTCCC TTTCGATGAT CGGCGAGTGG TGCGTGAGCT GCTGGAAAAT CGATCCAAGG AATCTTTGAA TCGGTTGCCA CCAGCCAAAT CTTTCATTGC AAACTCTTAT TCAGCAAGTG GTTGTAGCGA TATGGCTCCC GCTTCTTCGC CCATGGGGAT GGCTTTACAG ACGGAAGCCA TTCTGCCCAA TCCCGCCGCT GTCGAAACAG ATTCCTTGCA GCGTGTGAGT GCCTGA
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Protein sequence | MPPQHALPAS LSLKDHLPTA ELMGAGDIYF NDVTLDSREC RPKTLFVAAP GRNSHGSQFL EEAISRGAVG VVTSQVLPNC PLPQCVVANP RAAYAYLSQS LYGHPASRLR MMGVTGTNGK TTVSWMTRAL MAKSGYRTGL LGTVEYFDGY RAEPSVLTTP DAKLMAFWQH RMVSRGTTHL AMELSSHSLD QSRAAALPLD CAIVTNITHD HLDYHGDFAS YREAKARILD LVKPGGTIAL HINDPGAASL ASLVPAECRL IRYGVNVDAE LSAQILSESL SGTTFRVQYQ GQVMQMKLRI LGRHNIENAL AALAAGLAWK VPFLSMAEAL EEFRPVPGRM ERCTWGEPFD IFVDYAHTPD ALSRALCSLR GLTRGRLICV FGAGGDRDAT KRPLLGRAAS QADVAIVTSD NPRSENPEKI IQQICDGVPA QQVEVVIEVD RKLAIQHAIE QALPGDMILI AGKGHESEQI IGASHLPFDD RRVVRELLEN RSKESLNRLP PAKSFIANSY SASGCSDMAP ASSPMGMALQ TEAILPNPAA VETDSLQRVS A
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