Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0678 |
Symbol | |
ID | 9137359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 883783 |
End bp | 887751 |
Gene Length | 3969 bp |
Protein Length | 1322 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | ammonium transporter |
Protein accession | YP_003628724 |
Protein GI | 296120946 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.760367 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGATG CGTTTCAATC GGTTTCGCTG TTGTGGGTGA TGTGCGCCGC CATTCTCGTC TTCATGATGC AGGGTGGTTT CTGCCTGCTG GAAGCGGGTG TGACCCGCAC CAAGAACAGC ATTAACGTCG CGCTGAAAAA CCTCACAGAC TTTTGCATTT CAGCCATGAT CTTCTGGCTG TTTGGCTACG GCATCATGTT CGGCCACTCT GCCTATGGGT GGATTGGCAC TTCTCGCTTC ATGCCTGATG AGCAATTCTT CTCCATTGGT AGTACCCCCA CAGCGGCCTC GGCCATCGCG TTAGGATTTT TCCTGTTCCA GATGATGTTC TGCGGAACAT CGACCACGAT TGTTTCGGGT GCCGTCGCAG AGCGAATTCG CTTCGCCGGG TATCTGGTCC TCACCGTTGT ACTTTCCGGA TTGATCTATC CATTGTTTGG TCACTGGGCA TGGGGCGGGG CGGATACAGG ATCTCCCACC GGTTGGCTGG CAAAACTGGG CTTTGTCGAT TTTGCAGGCT CGACTGTTGT CCACGCCATT GGCGGATGGT TCTCTCTAGC TGCTGTCATC ATTATTGGCC CCAGACTGGG ACGCTTTGAT ACCAAAGCTC CTCGCATTCG TGGACATAAC CTCGTTTTGG CAACCTGCGG TGTCATGCTC CTCTGGGTCG GCTGGTTTGG CTTTAATGGC GGCAGCACAT TAGCACTCAA TTCACAGGTT CCTCGAATTC TGGTCGCTAC CAACCTGGCT GCGATTGCCA GTTGTTTAAC AGCTCTCTTT ATGGCCTGGT GGATCGAGAA ACGTGCCATT GTTGAAATGA CGCTCAATGG GGCACTGGGC GGGCTCGTGG CCGTGACCGC GTCATGCCAC ATTATTCCCT TTTGGGGAGC GGTCCTCTTG GGTGTTGGTG CCGGTGTCAT CTCCGTCGCA GTTACTTATT TACTCGATGA TTTCAAGATC GACGATGTCG TCTCTGCAGT TCCTGTTCAC GCAGCCTGTG GACTCTTTGG AACCGTCTTC TGGCCACTCT TTACTCCTGA GCAAAGTTTC CAGCACGGCA TGAGTTGCCT GCAGCAGTTT GGTGTGCAGT TGCTGGGCTC CGGGGTCGCG TTTGTCTGGG CATTTGGTGT CGGTGGAGTC TGTATTTATC TGATTAATAA AGTCATGCCT CTGCGCGTCA GAGCCCGCGA CGAAATTGTG GGATTGAACT TTGTCGAACA TGGGGCTTCC AACGACCTGG CCGAACTAAT GAGTACCATG AACGATCATC GGACCCGCGG TGATTTCAGC CAGCATGTCT TTGTTGAGCC CCATAGCGAA GTCGGCCAGA TCGCTGCAGA ATACAACCGC GTGCTGGATC GCGTGACGGA TGAAATTCGT GCCCGCGAAG AAACCACCCA CGCCTTGAAA TCGGCCGAAG AAAAATATCG CAGTATCTTT GAAAACGCCG TCGAAGGGAT CTTTCAAACC TCGCCGAGCG GGATCTACAT GAATGTGAAT CCTGCTCTGG CCAAGATCTA TGGCTACGAT TCCCCCAACG ATCTGATTGG CTCAATCGGC GACATTTCGA AAGATCTTTA TGTCGATCCA CAAAGACGGG CTGAGTTCTG CCGTCTGATT GAAACGGAAG GGGCCGTCAA AGGTTTTGTC TCGGAAGTTT ACAGGCGTGA TGGCAGTACC ATCTGGATCT CCGAAAACGC TCATCCGGTG AAGAATGCCG CTGGTCGCAT TTTATACTAT GAAGGCTCTG TAGAGGATGT CACCGAGGTT CGCCGAGCTG AACAATGGCG AGCAGAAAAA GCCGAAGCTG AAGCTGCTAA CGAAGCTAAA AGCCAATTTC TCGCCAAGAT GAGTCACGAA ATCCGGACTC CGCTCAACGG TGTCATTGGC ATGCTCGACT TGCTTAAAGC CACCTCGCTC GATGATCGCC AGAAACGCTA CGTGACCATC TGTCGTTCAT CGGCCGATAC CTTGCTGGGT TTAATAAACG ATATTCTCGA TCTCTCCAAA ATCGAGGCCG GTCGTATGGA ACTGGCTCTT GTTGATTTTG ATCTGCACCA ACTGGTCGAA GATATCTCCG AGATGTTTGT CCATCGTGCG GAAGGTAAAG GAGTCGAGCT GGCCTGCCAT ATTGCTCCCG ATGTCCCTCA ACGAATTGAA GGGGATCCAG AACGGTTGCG GCAGATCCTG GTCAATCTTG TCGGTAACGC TCTCAAGTTT ACTTCTGTCG GCTATGTCCT CATCAAGGTT TCGATGGCTC AATCCCCGAC TGGGGAGCAT CGCTTGCAGA TCCATGTCAA AGATACAGGG ATCGGAATTT CGCCAGCTCA GCAACAAAAA CTCTTCCAGC CCTTTACCCA GGCAGATGTC ACCACATCTC GTCGATTTGG CGGTACCGGG TTGGGGCTAT CGATCTGCCG TCAGTTGGCC GACCTGATGC AGGGATCGAT ACAGATAGAG AGTGCCGTCG GTGTCGGTAC GACATTTACT GTCGACCTGC CGTTAACCTC TGCTGAGGTT TCAAAAGTCG CTCCAGAGCA TGAGCCATTA GCCGGACTGC GTGTTCTGCT GGTCGATGAT AACGAAATTA ACCTCGAAAT TCTCAGCGAA CATCTGGTTG CCTGGGGTTG CCGGGTCAGT AAATGCCTCT CGGCAGAGAC CGCATTATCG CTATTAAGTA AACCAGCCAC CACAGGTCCA GCTTTCTCGA TTGCCATTAT CGATAAGCAA ATGCCAGGCT TTGATGGTGA AATGCTCGCT GGCAGCATTC GCAAGTACGC ACACCTGGAT TCCCTGCGCA TTCTCATGCT CACCAGTGTC GACTTCAGTG ATGCAGCAGT GGATGGGATC CCTCCGTGGG ATGCGTGGAT CAATAAACCT GTCCGGGCAG GACGTCTGCT CGAGATGTTG CAGAAACTGC GCGACTACGT TCCTTTAGAA AATGCTCGTG AATTGTCTGC ACAACAGCCA CTATCAGAAA CCAAAACACC TTCTGCGAGA ATTTTGATTG CCGACGATAA TGAGGTCAAC CTGATTGTGA CCACCGAGCT GGTCAGGTCA TTAGGCTTCG ATACAGAGAC AGCCGCTGAT GGGTCAATTG TCCTGGAGAA ACTGAAATCG CAAACTTATG ACCTGATACT TATGGATTGC CAGATGCCGA CCCTCGACGG CTTCGAAACC ACACGGAAGA TTCGAGAAAT CGAAAAACAA GCTCAGAACG GAGAGCATAT TCCGATTGTT GCTTTAACGG CGAACGCTAT TCAGGGAGAT AACGATCGCT GCCGACAGGC TGGCATGGAT GGCTATCTCA CAAAGCCGAT TGACCATGCT CAATTGAGTA ACACGTTGTT GCAAATACTG ACAACTCATC AGCCGGTTCC ACAGCAAGAA CACAAAGTTG ATATTGAGTT ATCCAGCAAC AAGAATCTGG TAACACAATT GTCCCCGGTC TCTGTAGGAA CAATTCCACA AGTAGTGACG GCTATTGAAA CGATTTCACC TGCAAAAAAT ATTACGAAGT CGATTCTTTC TTCAGTCTCT AGTGATTCCA TTGCGATACC AGAGGCCATC ATTAATGTTC ATCAGCAATC GATCGAAGCG GTGCAATTTC AGGAATTGGT CAATCGCTGC CGGAGAGATC ACGAGTTCGC CCTGAGAGTT CTTCAAAAAT TCGCCACCCG GGTACTGGCC GATAAGGCAC AATTCGCACT CGCTTTAGCT GCTGAAGATT CGAAAACTCT CAAATCGTTA TCTCACTCCT TGAAAGGTGC CGCAGCTAAC GTTGGTGCGA CTCGATTGGC CCAATTGGCT GGAAATCTCG AAGAGCAGAT CAGTGACGAG TCTTTAACTG TTCACGAACA GAATCTGAAT GACTTATTCA ATGAAATTGA TACAGTCAGA GAATGGATCG ATCGAAAGCT TCTGGCGGAG CATGCTCCAG CCAGTGCTGC TGGATCGGTG GCTCTCTAG
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Protein sequence | MLDAFQSVSL LWVMCAAILV FMMQGGFCLL EAGVTRTKNS INVALKNLTD FCISAMIFWL FGYGIMFGHS AYGWIGTSRF MPDEQFFSIG STPTAASAIA LGFFLFQMMF CGTSTTIVSG AVAERIRFAG YLVLTVVLSG LIYPLFGHWA WGGADTGSPT GWLAKLGFVD FAGSTVVHAI GGWFSLAAVI IIGPRLGRFD TKAPRIRGHN LVLATCGVML LWVGWFGFNG GSTLALNSQV PRILVATNLA AIASCLTALF MAWWIEKRAI VEMTLNGALG GLVAVTASCH IIPFWGAVLL GVGAGVISVA VTYLLDDFKI DDVVSAVPVH AACGLFGTVF WPLFTPEQSF QHGMSCLQQF GVQLLGSGVA FVWAFGVGGV CIYLINKVMP LRVRARDEIV GLNFVEHGAS NDLAELMSTM NDHRTRGDFS QHVFVEPHSE VGQIAAEYNR VLDRVTDEIR AREETTHALK SAEEKYRSIF ENAVEGIFQT SPSGIYMNVN PALAKIYGYD SPNDLIGSIG DISKDLYVDP QRRAEFCRLI ETEGAVKGFV SEVYRRDGST IWISENAHPV KNAAGRILYY EGSVEDVTEV RRAEQWRAEK AEAEAANEAK SQFLAKMSHE IRTPLNGVIG MLDLLKATSL DDRQKRYVTI CRSSADTLLG LINDILDLSK IEAGRMELAL VDFDLHQLVE DISEMFVHRA EGKGVELACH IAPDVPQRIE GDPERLRQIL VNLVGNALKF TSVGYVLIKV SMAQSPTGEH RLQIHVKDTG IGISPAQQQK LFQPFTQADV TTSRRFGGTG LGLSICRQLA DLMQGSIQIE SAVGVGTTFT VDLPLTSAEV SKVAPEHEPL AGLRVLLVDD NEINLEILSE HLVAWGCRVS KCLSAETALS LLSKPATTGP AFSIAIIDKQ MPGFDGEMLA GSIRKYAHLD SLRILMLTSV DFSDAAVDGI PPWDAWINKP VRAGRLLEML QKLRDYVPLE NARELSAQQP LSETKTPSAR ILIADDNEVN LIVTTELVRS LGFDTETAAD GSIVLEKLKS QTYDLILMDC QMPTLDGFET TRKIREIEKQ AQNGEHIPIV ALTANAIQGD NDRCRQAGMD GYLTKPIDHA QLSNTLLQIL TTHQPVPQQE HKVDIELSSN KNLVTQLSPV SVGTIPQVVT AIETISPAKN ITKSILSSVS SDSIAIPEAI INVHQQSIEA VQFQELVNRC RRDHEFALRV LQKFATRVLA DKAQFALALA AEDSKTLKSL SHSLKGAAAN VGATRLAQLA GNLEEQISDE SLTVHEQNLN DLFNEIDTVR EWIDRKLLAE HAPASAAGSV AL
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