Gene Plim_0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0678 
Symbol 
ID9137359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp883783 
End bp887751 
Gene Length3969 bp 
Protein Length1322 aa 
Translation table11 
GC content51% 
IMG OID 
Productammonium transporter 
Protein accessionYP_003628724 
Protein GI296120946 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.760367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGATG CGTTTCAATC GGTTTCGCTG TTGTGGGTGA TGTGCGCCGC CATTCTCGTC 
TTCATGATGC AGGGTGGTTT CTGCCTGCTG GAAGCGGGTG TGACCCGCAC CAAGAACAGC
ATTAACGTCG CGCTGAAAAA CCTCACAGAC TTTTGCATTT CAGCCATGAT CTTCTGGCTG
TTTGGCTACG GCATCATGTT CGGCCACTCT GCCTATGGGT GGATTGGCAC TTCTCGCTTC
ATGCCTGATG AGCAATTCTT CTCCATTGGT AGTACCCCCA CAGCGGCCTC GGCCATCGCG
TTAGGATTTT TCCTGTTCCA GATGATGTTC TGCGGAACAT CGACCACGAT TGTTTCGGGT
GCCGTCGCAG AGCGAATTCG CTTCGCCGGG TATCTGGTCC TCACCGTTGT ACTTTCCGGA
TTGATCTATC CATTGTTTGG TCACTGGGCA TGGGGCGGGG CGGATACAGG ATCTCCCACC
GGTTGGCTGG CAAAACTGGG CTTTGTCGAT TTTGCAGGCT CGACTGTTGT CCACGCCATT
GGCGGATGGT TCTCTCTAGC TGCTGTCATC ATTATTGGCC CCAGACTGGG ACGCTTTGAT
ACCAAAGCTC CTCGCATTCG TGGACATAAC CTCGTTTTGG CAACCTGCGG TGTCATGCTC
CTCTGGGTCG GCTGGTTTGG CTTTAATGGC GGCAGCACAT TAGCACTCAA TTCACAGGTT
CCTCGAATTC TGGTCGCTAC CAACCTGGCT GCGATTGCCA GTTGTTTAAC AGCTCTCTTT
ATGGCCTGGT GGATCGAGAA ACGTGCCATT GTTGAAATGA CGCTCAATGG GGCACTGGGC
GGGCTCGTGG CCGTGACCGC GTCATGCCAC ATTATTCCCT TTTGGGGAGC GGTCCTCTTG
GGTGTTGGTG CCGGTGTCAT CTCCGTCGCA GTTACTTATT TACTCGATGA TTTCAAGATC
GACGATGTCG TCTCTGCAGT TCCTGTTCAC GCAGCCTGTG GACTCTTTGG AACCGTCTTC
TGGCCACTCT TTACTCCTGA GCAAAGTTTC CAGCACGGCA TGAGTTGCCT GCAGCAGTTT
GGTGTGCAGT TGCTGGGCTC CGGGGTCGCG TTTGTCTGGG CATTTGGTGT CGGTGGAGTC
TGTATTTATC TGATTAATAA AGTCATGCCT CTGCGCGTCA GAGCCCGCGA CGAAATTGTG
GGATTGAACT TTGTCGAACA TGGGGCTTCC AACGACCTGG CCGAACTAAT GAGTACCATG
AACGATCATC GGACCCGCGG TGATTTCAGC CAGCATGTCT TTGTTGAGCC CCATAGCGAA
GTCGGCCAGA TCGCTGCAGA ATACAACCGC GTGCTGGATC GCGTGACGGA TGAAATTCGT
GCCCGCGAAG AAACCACCCA CGCCTTGAAA TCGGCCGAAG AAAAATATCG CAGTATCTTT
GAAAACGCCG TCGAAGGGAT CTTTCAAACC TCGCCGAGCG GGATCTACAT GAATGTGAAT
CCTGCTCTGG CCAAGATCTA TGGCTACGAT TCCCCCAACG ATCTGATTGG CTCAATCGGC
GACATTTCGA AAGATCTTTA TGTCGATCCA CAAAGACGGG CTGAGTTCTG CCGTCTGATT
GAAACGGAAG GGGCCGTCAA AGGTTTTGTC TCGGAAGTTT ACAGGCGTGA TGGCAGTACC
ATCTGGATCT CCGAAAACGC TCATCCGGTG AAGAATGCCG CTGGTCGCAT TTTATACTAT
GAAGGCTCTG TAGAGGATGT CACCGAGGTT CGCCGAGCTG AACAATGGCG AGCAGAAAAA
GCCGAAGCTG AAGCTGCTAA CGAAGCTAAA AGCCAATTTC TCGCCAAGAT GAGTCACGAA
ATCCGGACTC CGCTCAACGG TGTCATTGGC ATGCTCGACT TGCTTAAAGC CACCTCGCTC
GATGATCGCC AGAAACGCTA CGTGACCATC TGTCGTTCAT CGGCCGATAC CTTGCTGGGT
TTAATAAACG ATATTCTCGA TCTCTCCAAA ATCGAGGCCG GTCGTATGGA ACTGGCTCTT
GTTGATTTTG ATCTGCACCA ACTGGTCGAA GATATCTCCG AGATGTTTGT CCATCGTGCG
GAAGGTAAAG GAGTCGAGCT GGCCTGCCAT ATTGCTCCCG ATGTCCCTCA ACGAATTGAA
GGGGATCCAG AACGGTTGCG GCAGATCCTG GTCAATCTTG TCGGTAACGC TCTCAAGTTT
ACTTCTGTCG GCTATGTCCT CATCAAGGTT TCGATGGCTC AATCCCCGAC TGGGGAGCAT
CGCTTGCAGA TCCATGTCAA AGATACAGGG ATCGGAATTT CGCCAGCTCA GCAACAAAAA
CTCTTCCAGC CCTTTACCCA GGCAGATGTC ACCACATCTC GTCGATTTGG CGGTACCGGG
TTGGGGCTAT CGATCTGCCG TCAGTTGGCC GACCTGATGC AGGGATCGAT ACAGATAGAG
AGTGCCGTCG GTGTCGGTAC GACATTTACT GTCGACCTGC CGTTAACCTC TGCTGAGGTT
TCAAAAGTCG CTCCAGAGCA TGAGCCATTA GCCGGACTGC GTGTTCTGCT GGTCGATGAT
AACGAAATTA ACCTCGAAAT TCTCAGCGAA CATCTGGTTG CCTGGGGTTG CCGGGTCAGT
AAATGCCTCT CGGCAGAGAC CGCATTATCG CTATTAAGTA AACCAGCCAC CACAGGTCCA
GCTTTCTCGA TTGCCATTAT CGATAAGCAA ATGCCAGGCT TTGATGGTGA AATGCTCGCT
GGCAGCATTC GCAAGTACGC ACACCTGGAT TCCCTGCGCA TTCTCATGCT CACCAGTGTC
GACTTCAGTG ATGCAGCAGT GGATGGGATC CCTCCGTGGG ATGCGTGGAT CAATAAACCT
GTCCGGGCAG GACGTCTGCT CGAGATGTTG CAGAAACTGC GCGACTACGT TCCTTTAGAA
AATGCTCGTG AATTGTCTGC ACAACAGCCA CTATCAGAAA CCAAAACACC TTCTGCGAGA
ATTTTGATTG CCGACGATAA TGAGGTCAAC CTGATTGTGA CCACCGAGCT GGTCAGGTCA
TTAGGCTTCG ATACAGAGAC AGCCGCTGAT GGGTCAATTG TCCTGGAGAA ACTGAAATCG
CAAACTTATG ACCTGATACT TATGGATTGC CAGATGCCGA CCCTCGACGG CTTCGAAACC
ACACGGAAGA TTCGAGAAAT CGAAAAACAA GCTCAGAACG GAGAGCATAT TCCGATTGTT
GCTTTAACGG CGAACGCTAT TCAGGGAGAT AACGATCGCT GCCGACAGGC TGGCATGGAT
GGCTATCTCA CAAAGCCGAT TGACCATGCT CAATTGAGTA ACACGTTGTT GCAAATACTG
ACAACTCATC AGCCGGTTCC ACAGCAAGAA CACAAAGTTG ATATTGAGTT ATCCAGCAAC
AAGAATCTGG TAACACAATT GTCCCCGGTC TCTGTAGGAA CAATTCCACA AGTAGTGACG
GCTATTGAAA CGATTTCACC TGCAAAAAAT ATTACGAAGT CGATTCTTTC TTCAGTCTCT
AGTGATTCCA TTGCGATACC AGAGGCCATC ATTAATGTTC ATCAGCAATC GATCGAAGCG
GTGCAATTTC AGGAATTGGT CAATCGCTGC CGGAGAGATC ACGAGTTCGC CCTGAGAGTT
CTTCAAAAAT TCGCCACCCG GGTACTGGCC GATAAGGCAC AATTCGCACT CGCTTTAGCT
GCTGAAGATT CGAAAACTCT CAAATCGTTA TCTCACTCCT TGAAAGGTGC CGCAGCTAAC
GTTGGTGCGA CTCGATTGGC CCAATTGGCT GGAAATCTCG AAGAGCAGAT CAGTGACGAG
TCTTTAACTG TTCACGAACA GAATCTGAAT GACTTATTCA ATGAAATTGA TACAGTCAGA
GAATGGATCG ATCGAAAGCT TCTGGCGGAG CATGCTCCAG CCAGTGCTGC TGGATCGGTG
GCTCTCTAG
 
Protein sequence
MLDAFQSVSL LWVMCAAILV FMMQGGFCLL EAGVTRTKNS INVALKNLTD FCISAMIFWL 
FGYGIMFGHS AYGWIGTSRF MPDEQFFSIG STPTAASAIA LGFFLFQMMF CGTSTTIVSG
AVAERIRFAG YLVLTVVLSG LIYPLFGHWA WGGADTGSPT GWLAKLGFVD FAGSTVVHAI
GGWFSLAAVI IIGPRLGRFD TKAPRIRGHN LVLATCGVML LWVGWFGFNG GSTLALNSQV
PRILVATNLA AIASCLTALF MAWWIEKRAI VEMTLNGALG GLVAVTASCH IIPFWGAVLL
GVGAGVISVA VTYLLDDFKI DDVVSAVPVH AACGLFGTVF WPLFTPEQSF QHGMSCLQQF
GVQLLGSGVA FVWAFGVGGV CIYLINKVMP LRVRARDEIV GLNFVEHGAS NDLAELMSTM
NDHRTRGDFS QHVFVEPHSE VGQIAAEYNR VLDRVTDEIR AREETTHALK SAEEKYRSIF
ENAVEGIFQT SPSGIYMNVN PALAKIYGYD SPNDLIGSIG DISKDLYVDP QRRAEFCRLI
ETEGAVKGFV SEVYRRDGST IWISENAHPV KNAAGRILYY EGSVEDVTEV RRAEQWRAEK
AEAEAANEAK SQFLAKMSHE IRTPLNGVIG MLDLLKATSL DDRQKRYVTI CRSSADTLLG
LINDILDLSK IEAGRMELAL VDFDLHQLVE DISEMFVHRA EGKGVELACH IAPDVPQRIE
GDPERLRQIL VNLVGNALKF TSVGYVLIKV SMAQSPTGEH RLQIHVKDTG IGISPAQQQK
LFQPFTQADV TTSRRFGGTG LGLSICRQLA DLMQGSIQIE SAVGVGTTFT VDLPLTSAEV
SKVAPEHEPL AGLRVLLVDD NEINLEILSE HLVAWGCRVS KCLSAETALS LLSKPATTGP
AFSIAIIDKQ MPGFDGEMLA GSIRKYAHLD SLRILMLTSV DFSDAAVDGI PPWDAWINKP
VRAGRLLEML QKLRDYVPLE NARELSAQQP LSETKTPSAR ILIADDNEVN LIVTTELVRS
LGFDTETAAD GSIVLEKLKS QTYDLILMDC QMPTLDGFET TRKIREIEKQ AQNGEHIPIV
ALTANAIQGD NDRCRQAGMD GYLTKPIDHA QLSNTLLQIL TTHQPVPQQE HKVDIELSSN
KNLVTQLSPV SVGTIPQVVT AIETISPAKN ITKSILSSVS SDSIAIPEAI INVHQQSIEA
VQFQELVNRC RRDHEFALRV LQKFATRVLA DKAQFALALA AEDSKTLKSL SHSLKGAAAN
VGATRLAQLA GNLEEQISDE SLTVHEQNLN DLFNEIDTVR EWIDRKLLAE HAPASAAGSV
AL