Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0673 |
Symbol | |
ID | 9137354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 876340 |
End bp | 877182 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Phytanoyl-CoA dioxygenase |
Protein accession | YP_003628719 |
Protein GI | 296120941 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTCAAAG ATCAATTTCA GGCCGTGCCA GATTCATCAC AACTGCAGCA GATCGAACGC GATCTGCGCT TCTACCCCAC CACAAATGCA CACCCACAAG TCCTTTCTCA AGAACAGGTT GAGCAGTTTA ACCGTGACGG ATACATCAAG GATCTGACGA TCTTTTCCCC TGCGGAAATC GCCTCGATCC GTCAGCAATT CGATGAATTA CTTTCTCGCA CACTGGCGAC GGGGGCTGAC AGTTATTCCA TCAGTTCAGC ACATCTCAAG TATGGATTCT GTTGGGATCT GCTGACGAAT TCCCGCATTG TCGCCATTGT TAAAGATCTG CTGGGTGAAA ATGTCGTCGC CTGGGGCTCG CATTTCTTCT GCAAAATGCC TGGAGACGGT AAAGCGGTCG CCTGGCATCA GGATGCCAGC TATTGGCCAC TGAGCCCTTC TCGCAATGTG ACTGCCTGGC TCGCCATCGA CGATGCTGAC ATCGAGAATG GCTGCATGCG TTTTATCGCA GGCTCGCATC AATACGGGCA TATGACCTTC CGCGATAGTA ATCCTGCCGA ACATAACGTT CTCAACCAGA CGATCGAAAA CCCCTGGCAA TATGGCCACG AAGTCATCGA CTCGCTGGCA GCAGGGCAGA TTTCGATTCA CTCTGATCTT TTGCTCCATG GTTCCGAAGC CAACAATTCC TCGCGTCGCC GTTGCGGATT AACTCTTCGC TATGCCGCTG CAGAAGTCCG TGCGGCTCTC GACTGGAATC AGAAAGGAGT CATCGTCAGT GGCAGCGATC CCTCAGGACA CTGGGCCAAT CGTCCACGCC CCACTCGGGA TCTTCCCGAG TAA
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Protein sequence | MLKDQFQAVP DSSQLQQIER DLRFYPTTNA HPQVLSQEQV EQFNRDGYIK DLTIFSPAEI ASIRQQFDEL LSRTLATGAD SYSISSAHLK YGFCWDLLTN SRIVAIVKDL LGENVVAWGS HFFCKMPGDG KAVAWHQDAS YWPLSPSRNV TAWLAIDDAD IENGCMRFIA GSHQYGHMTF RDSNPAEHNV LNQTIENPWQ YGHEVIDSLA AGQISIHSDL LLHGSEANNS SRRRCGLTLR YAAAEVRAAL DWNQKGVIVS GSDPSGHWAN RPRPTRDLPE
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