Gene Plim_0673 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0673 
Symbol 
ID9137354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp876340 
End bp877182 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content53% 
IMG OID 
ProductPhytanoyl-CoA dioxygenase 
Protein accessionYP_003628719 
Protein GI296120941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTCAAAG ATCAATTTCA GGCCGTGCCA GATTCATCAC AACTGCAGCA GATCGAACGC 
GATCTGCGCT TCTACCCCAC CACAAATGCA CACCCACAAG TCCTTTCTCA AGAACAGGTT
GAGCAGTTTA ACCGTGACGG ATACATCAAG GATCTGACGA TCTTTTCCCC TGCGGAAATC
GCCTCGATCC GTCAGCAATT CGATGAATTA CTTTCTCGCA CACTGGCGAC GGGGGCTGAC
AGTTATTCCA TCAGTTCAGC ACATCTCAAG TATGGATTCT GTTGGGATCT GCTGACGAAT
TCCCGCATTG TCGCCATTGT TAAAGATCTG CTGGGTGAAA ATGTCGTCGC CTGGGGCTCG
CATTTCTTCT GCAAAATGCC TGGAGACGGT AAAGCGGTCG CCTGGCATCA GGATGCCAGC
TATTGGCCAC TGAGCCCTTC TCGCAATGTG ACTGCCTGGC TCGCCATCGA CGATGCTGAC
ATCGAGAATG GCTGCATGCG TTTTATCGCA GGCTCGCATC AATACGGGCA TATGACCTTC
CGCGATAGTA ATCCTGCCGA ACATAACGTT CTCAACCAGA CGATCGAAAA CCCCTGGCAA
TATGGCCACG AAGTCATCGA CTCGCTGGCA GCAGGGCAGA TTTCGATTCA CTCTGATCTT
TTGCTCCATG GTTCCGAAGC CAACAATTCC TCGCGTCGCC GTTGCGGATT AACTCTTCGC
TATGCCGCTG CAGAAGTCCG TGCGGCTCTC GACTGGAATC AGAAAGGAGT CATCGTCAGT
GGCAGCGATC CCTCAGGACA CTGGGCCAAT CGTCCACGCC CCACTCGGGA TCTTCCCGAG
TAA
 
Protein sequence
MLKDQFQAVP DSSQLQQIER DLRFYPTTNA HPQVLSQEQV EQFNRDGYIK DLTIFSPAEI 
ASIRQQFDEL LSRTLATGAD SYSISSAHLK YGFCWDLLTN SRIVAIVKDL LGENVVAWGS
HFFCKMPGDG KAVAWHQDAS YWPLSPSRNV TAWLAIDDAD IENGCMRFIA GSHQYGHMTF
RDSNPAEHNV LNQTIENPWQ YGHEVIDSLA AGQISIHSDL LLHGSEANNS SRRRCGLTLR
YAAAEVRAAL DWNQKGVIVS GSDPSGHWAN RPRPTRDLPE