Gene Plim_0588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0588 
Symbol 
ID9137267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp757906 
End bp761757 
Gene Length3852 bp 
Protein Length1283 aa 
Translation table11 
GC content54% 
IMG OID 
ProductProlyl oligopeptidase 
Protein accessionYP_003628635 
Protein GI296120857 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACAG CCTCTCGACG AGATACAAAA TGCCATATCC TCGCATTTCT TTCTCTGGCA 
ATGCTCTGTC TTTCGGGAAT GCAATTCATG TCGATTGCTG CTGCTGAAGA GATCTTGTTG
AAACCACCCG TGGCAAAAAC GGATAACGTT CCCGAAGTCT TTCATGGCGA AACGATCGTC
GATCCCTACC GCTGGCTCGA AGATCAAAAA GCTCCCGCCA CTCGGGAATG GCTCAGCGAG
CAGGCTCAGT ACATCACAAG TTCTGCCAGT AGCTGGCCGC AAATTCCTGA ACTCAAGGCC
CGGTTAGCCG AGCTTCTCAA AGTGGACAGT GTCGGCATGC CGGTCGTTCG TGGAGGTCGC
GCTTTCTTCT CGAAACGCAC CGCCTCTGCC GATGTCCCCA GCATCTGGTA CAGGCCATCG
GTGAATGCTC CCGATGAACT CCTGATTGAT CCGCAGAAGC TCTCGTCGGA TGGAAAAACG
ACTGTCAATC TGATGGACGT CACTCACGAT GGCAACCTGC TCATCTGTGG TGTTCGCACT
GGTGGCGAGG ACGAAGTCAC CCCTCGCCTG TTCAATGTCA CCACCAAATC GTTTGCAAAG
ACCGAGTTCC CGAAAGGTCG CTATTCCAGC CTGTCGTTCT CACGCGATGG CCAGAAGGTC
TATCTTTCGC GTCACGATCA GAAGATCGGC CCCCGCGCGT ACGTTCGCGA CCTCGCTACT
GGAAAGGAAA CACTCCTGTT TGGCGAGAAG TTCGGCCCGG AGAAGATTCT CGGTGTGCGT
CTCTCAGAAG ATGACCAATG GCTCATTTAT CATGTTTATC TCGGGGCCTC CTCGCAGAAT
GATGTCTACA TTCAGTCGCT CGCCAAGCCC AACGAGCCGA TCCTTCCCTT CGCTGTCGGT
CTTGAGGCCG AGTTTGAAGT CGATGCCATT GATCATCGTG CGATTGTCCG GACCACCTGG
AAAGCACCCC GAGGCCAGCT GCTTCTCGCA GATCTTCGTC AACCGGTCCT TGATCAATGC
CCCGTCATTG TCCCTCAGTC TGAGGCATCA CTCGAAGGGA TCTCACTCGT TGGGGGGAAG
CTTTTTATCC GCTGGTTGCG AAACGTGGTC TCAGAACTCA AAGCCTACGA TCTCACCGGG
AAAGAACTTT TCTCAATCGA TCCTCCGACG TTGGGATCGA TCTCAGGCGC CTCAGGGGCG
TGGGATCAAT CCGAACTCTA CTATAGTTTC AGCAGCTATA TTGTTCCGGG GACAATCTAT
CAGTTCGATA TTCCCACACA GAAAACGACT GTCTGGCATC AATCCGAGAT CCCCTTCGAT
AGCGAAAAGT TCACTGTCCG GCAGGTGTGG TTCCCCTCCA AAGACGGAAC GCGCATCCCC
ATGTTTATCG CTCATCGCAA AGGCCTCGAA CTCAATGGCA CGAACCCCAC TTTGCTCTAT
GGCTATGGAG GTTTCGCGGT CAATCTCACC CCCGGCTTCT CCACCAAAGC CGCCCTCTGG
ATGGAACTGG GTGGTGTGTA TGCCGTCGCC AACCTGAGGG GTGGCGGCGA GTTTGGCGAA
GACTGGCACA CGGCCGGCTA TCTCAAAAAG AAGCAGAACG TCTTTGATGA TTTTTATGCG
GCTGCCGAAT ACCTGATTGC CAACAAGTAC ACATCGCCCG CCCATCTGGC CATTAATGGT
GGCAGTAACG GTGGTCTCCT CGTGGGCACC GCCATGACCC AGCGACCCGA GCTCTTTGCA
GCGGTCGTCT GTTCCTACCC GCTGCTCGAT ATGCTCCGTT ATCACCAGTT CCTCGTGGCT
CGTTTCTGGG TCCCCGAGTA CGGCAGCAGC GAAGATCCCG AAATGTATCC CATTCTCAAG
TCGTATTCGC CCTATCACCA CATCGACCCG AACGTGAACT ACCCGGCGGC CATGTTCATT
ACCGGAGATG CGGATACGCG AGTTGATCCC AACCATGCCC GCAAGATGGT TGCCCGGCTG
CAAGCCGTCC CCGCGCTCAA GCGACCGATC TTCCTGATGT ACGATGATGC GCTGGGACAC
ACCGGTGCCC GGCCTGTCAG TAAGACCATC GAAGATCTCG CGATCGAACT CGCCTTTCTG
CTGAAATACA CACAAGGTGC AGGACCTTCC GGTGGATCAA CGTCACAAGA ATTGCCGGTC
TGCTCGAAAA CTGTCGCCGA TGCCGAGCTT GAAGCCTTCT TCGATCAGGA GTGGGAACAG
ACACTCAAGA ACTCGCCCAC ATTTGCCTCA TATCTAGGCG ATACCCGCTA CGATGCCCTC
TGGCCAGACA TCTCGCTTCC TGCCATCAAG CAGCGTCACG AGCAGATGAA GATCTCTGCC
GAAAAGCTGG AACAGATTCG CGGGAAGCCA CTCTCGGCCA AAGCTCAGTT CAACGCCAGG
CTCTATGCCC GCCAACTCGC GATGAACATC GAAGAAACGA AAACCAAATG GTACCTCGTC
CCTCTCACTC AGCGGGAAGG AATCCAGGAT GAAAACTCCA TCACTGACTC GATTCAGTTT
GGCGATCTTG CCAGCTATCA GAACTGGATT GCGCGCATCA ACAGTTTTCC TGTCTATATG
GATCAGACAA TTGCCTTGAT GGAAGAAGGG ATTCGCGCAG GCCGCCTGCA ACCGAAGATC
ACCATGCAGC GGGTCGTCAA GCAGATTGAG CGACAAATTG TCAAAGATCC GACACAAAGC
CTGTTCTATA AGCCCTTTAC CAGCATTCCT CAAGATCTCG CTCCGCAGCG GGATGAGCTC
CAGCAGGCCG CTCAGGAAGC GATTCGTACC AAGATTGTCC CTGCCTATCA GAAGTTCCTC
GATTTCTTTA CGAACAAGTA TCTACCGGCG TGCTATGCAG GAGCTGGCGT TTCGAATCTT
CCTGGCGGCG ACGAAGTCTA CAAGTTTCGA GTCCGTGAAT TTACGACTCT CGATATGACC
CCTAATGAAG TTCATCAGAT AGGCCTGAAT GAAGTCGCGC GCATTCGTGC CGAAATGGAA
AAGATCCGCG AGCAGGTTCA ATTTCAGGGC GATCTGAAGG CCTTCTTCGA ATCCTTACGC
ACTGATCCCA GGTTCTACTT CCAGAATGAA AAAGAACTTC TCACTGAATA CGAAGCCTTT
TGTAAACGGG TAGACCCGCA ACTCACGAAA CTCTTTAAGA CGTTGCCGCG AATTCCTTAT
GGCGTGAAGG CGATCCCCGC CAATATGGCG CCAGATACCA CAGCGGCCTA TTACTACCCA
CCATCGGCCG ATGGCTCTCG TGCCGGAATG TTCTTTGTGA ATCTCTATCA GCCCCAAATG
CGACCCAAGT ACGAGATTCC CGCGTTGTCG CTCCATGAAT CCGTTCCCGG GCATCACCTG
CAGATTGCGT TATCAACCGA ACTCGAAGGC GTCCCCAACT TCCGCCGCTT CGCTGGATTT
ACGGCTTTCG TCGAAGGCTG GGCACTCTAT AGTGAAAGCC TCGGCGAAGA ATTAGGTGTC
TATGACGACC CTTATGCCAA ATTCGGGCAA CTCACGTATG AGATGTGGCG TGCGATCCGT
CTGGTGGTCG ATACCGGCAT TCACTCGAAA GGCTGGACTC GGGAACAGGC CATCCAGTTT
TTCCGAGATA ACTCGGCCAA GACGGAACTC GATATAGTGA ACGAGGTGGA TCGTTATATT
TCGTGGCCCG GTCAGGCTCT GGCTTACAAG ATTGGCGAAT TGAAGATCAA GGAACTTCGC
AAGAAGGCCA AGGCTCAACT GGGCGAAAAA CTCGACCTAC GCGAATTCCA CGATGTCATT
CTCAAGAATG GAGCCATCCC ACTGGCAGAA CTGGAAGTCG TCGTTGACGA CTGGCTCGCC
ACCAAAAAGT AA
 
Protein sequence
MPTASRRDTK CHILAFLSLA MLCLSGMQFM SIAAAEEILL KPPVAKTDNV PEVFHGETIV 
DPYRWLEDQK APATREWLSE QAQYITSSAS SWPQIPELKA RLAELLKVDS VGMPVVRGGR
AFFSKRTASA DVPSIWYRPS VNAPDELLID PQKLSSDGKT TVNLMDVTHD GNLLICGVRT
GGEDEVTPRL FNVTTKSFAK TEFPKGRYSS LSFSRDGQKV YLSRHDQKIG PRAYVRDLAT
GKETLLFGEK FGPEKILGVR LSEDDQWLIY HVYLGASSQN DVYIQSLAKP NEPILPFAVG
LEAEFEVDAI DHRAIVRTTW KAPRGQLLLA DLRQPVLDQC PVIVPQSEAS LEGISLVGGK
LFIRWLRNVV SELKAYDLTG KELFSIDPPT LGSISGASGA WDQSELYYSF SSYIVPGTIY
QFDIPTQKTT VWHQSEIPFD SEKFTVRQVW FPSKDGTRIP MFIAHRKGLE LNGTNPTLLY
GYGGFAVNLT PGFSTKAALW MELGGVYAVA NLRGGGEFGE DWHTAGYLKK KQNVFDDFYA
AAEYLIANKY TSPAHLAING GSNGGLLVGT AMTQRPELFA AVVCSYPLLD MLRYHQFLVA
RFWVPEYGSS EDPEMYPILK SYSPYHHIDP NVNYPAAMFI TGDADTRVDP NHARKMVARL
QAVPALKRPI FLMYDDALGH TGARPVSKTI EDLAIELAFL LKYTQGAGPS GGSTSQELPV
CSKTVADAEL EAFFDQEWEQ TLKNSPTFAS YLGDTRYDAL WPDISLPAIK QRHEQMKISA
EKLEQIRGKP LSAKAQFNAR LYARQLAMNI EETKTKWYLV PLTQREGIQD ENSITDSIQF
GDLASYQNWI ARINSFPVYM DQTIALMEEG IRAGRLQPKI TMQRVVKQIE RQIVKDPTQS
LFYKPFTSIP QDLAPQRDEL QQAAQEAIRT KIVPAYQKFL DFFTNKYLPA CYAGAGVSNL
PGGDEVYKFR VREFTTLDMT PNEVHQIGLN EVARIRAEME KIREQVQFQG DLKAFFESLR
TDPRFYFQNE KELLTEYEAF CKRVDPQLTK LFKTLPRIPY GVKAIPANMA PDTTAAYYYP
PSADGSRAGM FFVNLYQPQM RPKYEIPALS LHESVPGHHL QIALSTELEG VPNFRRFAGF
TAFVEGWALY SESLGEELGV YDDPYAKFGQ LTYEMWRAIR LVVDTGIHSK GWTREQAIQF
FRDNSAKTEL DIVNEVDRYI SWPGQALAYK IGELKIKELR KKAKAQLGEK LDLREFHDVI
LKNGAIPLAE LEVVVDDWLA TKK