Gene Plim_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0557 
Symbol 
ID9137235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp694572 
End bp695327 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content54% 
IMG OID 
Productregulatory protein TetR 
Protein accessionYP_003628604 
Protein GI296120826 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCGTCA AGTTCTTCCC TGTCGGTGTC CCCATGAACT CACCCATCAA GCCCGGACGC 
CCTGCGAATC CCCAGTTGCG TAAGCAGCGC GAAGAGGAGA TCCTTCAGGC GGCGGCGGCT 
CTCTTTGCAG AAAAAGGATA CGCGCCGACC GATTTACAGG AACTTGCTCA GAGGTTGGGT 
GTCGGTAAGG GGACGGTCTA CCGCTACTTC CCCACGAAGC AGGACCTCTT TCTCGCTACG 
GTGAAGCATG AGATTACGAG ATTCACAACG ACCCTCGAAA GCATGGTACC ACGCGACGCT 
CCTCTCATTG AGCAGATGTC CCTCGTCATC GAAGCTTACC TGCAGTTCTT TCAGCAGAAT 
CCGGATGTCG TCGAACTGAT GGTGATTGAA AGATCACACT TCAAGCATCG ACGCCCCACG 
TACTTCGATC TCGAAGACGA TCCCTCCTGT GCCCGCTGGG ATGCACTTGT TTCAGCACTC 
ATGGAACAAG GGGTCATGCG CTCCATGCCT CTCGAAAAAG TTCGGCGGGT CGTGGGAGAT 
CTCATCTATG GCACCATGTT TTCCAATTAC ATGGCCGGAA GAATCGCCAA TCCCCAGGAG 
CAGGCTCAAG AAATTATGGA TCTGCTCTAT GGAGGCTTAC TGACTGGCGA GGGATGGGAG 
GTCTGGAGGA CCCACATGAA CACTCTCTGC TCATTACGTC ACCCGAACGA TAACAAAGAG 
CCTCCGAGTT CAACGCCAGC CTCACATAGA AACTAA
 
Protein sequence
MFVKFFPVGV PMNSPIKPGR PANPQLRKQR EEEILQAAAA LFAEKGYAPT DLQELAQRLG 
VGKGTVYRYF PTKQDLFLAT VKHEITRFTT TLESMVPRDA PLIEQMSLVI EAYLQFFQQN 
PDVVELMVIE RSHFKHRRPT YFDLEDDPSC ARWDALVSAL MEQGVMRSMP LEKVRRVVGD 
LIYGTMFSNY MAGRIANPQE QAQEIMDLLY GGLLTGEGWE VWRTHMNTLC SLRHPNDNKE 
PPSSTPASHR N