| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0471 |
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| Symbol | |
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| ID | 9137136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 595503 |
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| End bp | 596747 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_003628519 |
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| Protein GI | 296120741 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCGCT GGATATTGCC AGTTCTTGCT GCCGTGGCCT TGGCGTTTTC ACTCGTTCAT
ATGAGTTTGG AAAATGTGCG CCCACCGGCA CAGTTCCCGC CTGTGGAACC GGCCAGGTCA
CCTTATCGAC AGGTGGTGGC CGGGTCCGGT CTGATTGAAG CGAAGTCGGA GAACATCTCA
GTGGCTGCTG AAACCGCTGG TGTTGTTACA GAGATTGCCG TTCGAGTGGG CCAGTCGGTC
GAAAAGGGCC AGGTATTATT CCGCCTCGAT GATCGAAAAC AGCGTTCCGA GCTGGGAGTT
CAGACCGCAG CGCTTCTATC GGCCAAAGCT GAGTTGGAGC GATTGAAAGC GTTACCTCGG
CCAGAAGATC TTCCTCCCAG TGCTGCAAAA CTGGCAGAGG CCCGTGAGGA TCTGGAGTTG
CAGAGAGACC AGCTCAACCG TGCCGAAGAA TTGGTGGCGA AACGAGTGAT CCAGCAGGAA
GAACTCGTCC AAAGAAAGCA GGCCTATTCG ATGGCCCGGG CCCGGCTGGA GAACGCCGAG
GCGCAGGATC AAAAACTTCG GGCAGGTGCC TGGAGTTATG AAATTGATGT GCAGAAAGCA
GCTGTCCTGC GGGCTGAACA GCAAGTGGCT CAGGCCCAAA CAGAAATTGA CCGGCTGGTG
GTGAAATCTC CGATCAATGG CGTGGTGCTG AAAGTCGATT TGCGGCCTGG AGAATTCGTC
GGAGCCCCAC CGGGTCAGCC ATTGATCATC ATGGGTGATC TTTCGACCCT GCATGTGCGC
GTCGATATTG ATGAGCAGGA TATCCCCAGA TTTCGTCCCG GATTGCCTGC CAAGGGATTT
TTGCGTGGAG ACGCCAAGTT TCCCATCGAT CTTTCATTTG TGCGAGTAGA ACCCTACACG
CAGCCCAAAA AGTCATTGAC CGGTGATAGT AAAGAGCGTG TGGACACTCG CGTCCTGCAG
GTGATCTACG CGATTGACCC CAATTGGCGA TCCAAGGGAA AGTCGCCATC CAAAACCGAA
AACACCACAC CTGTGCCATC AGCAGGTCAA CCCGCAACGC ACCCACTTGA AAATGAAATC
CTGGCCGCGG ATGAACCCGT TGAGATTTAC GTCGGACAGC AGATCGATGT CTTTATTGAC
ATCGAAGAGA AGCCTTCGGC CGCTCAGCCG GAGAAAACTT CGCAGGCCAG ACGCAAGCCA
GTGTCTTCTG AGAGAATGGT GGCGTTATCA GAGGTGGCGC CCTGA
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| Protein sequence | MRRWILPVLA AVALAFSLVH MSLENVRPPA QFPPVEPARS PYRQVVAGSG LIEAKSENIS
VAAETAGVVT EIAVRVGQSV EKGQVLFRLD DRKQRSELGV QTAALLSAKA ELERLKALPR
PEDLPPSAAK LAEAREDLEL QRDQLNRAEE LVAKRVIQQE ELVQRKQAYS MARARLENAE
AQDQKLRAGA WSYEIDVQKA AVLRAEQQVA QAQTEIDRLV VKSPINGVVL KVDLRPGEFV
GAPPGQPLII MGDLSTLHVR VDIDEQDIPR FRPGLPAKGF LRGDAKFPID LSFVRVEPYT
QPKKSLTGDS KERVDTRVLQ VIYAIDPNWR SKGKSPSKTE NTTPVPSAGQ PATHPLENEI
LAADEPVEIY VGQQIDVFID IEEKPSAAQP EKTSQARRKP VSSERMVALS EVAP
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