| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0466 |
|---|
| Symbol | |
|---|
| ID | 9137131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 590987 |
|---|
| End bp | 592108 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | chalcone and stilbene synthase domain protein |
|---|
| Protein accession | YP_003628514 |
|---|
| Protein GI | 296120736 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATGC TCATTTCTGG AATCGGGACT GCTGCTCCCG CATCACGAAT CCCGCAAATG
GATGCTTACT CTGCCATGAG CAACACCTGT TGCGACTCCG ATGAACATCG CCGGGTCATG
GAAATGATCT ATCAGGGATC AGGCGTCAAA CATCGCGGCT CTGTTCTAGT CGGTGCGGAA
CCAGAAGATT TCATTCGAGC CGACGATCGA GATGAATTCT TCTTTTACGA ACGCGAGAAC
GAAGAAGATT ACGGGCCCTC CACGCAGGAA CGCATGAGGC AATACGAGCA GCATGCCTTA
CCACTGGCCA TCAAATCATC TGTCGCTGCA CTCCGGGATG CAGGCCAGGA CGCCAGAGAG
ATCACGCACA TAGTGACGGT TTCCTGCAGT GGATTTAATT CTCCCGGCGT GGACATGGGC
CTGATTGAAG AACTGGGCCT CAACCGCAAC ACCTCACGAA CTCATGTCGG CTTCATGGGT
TGCCACGGCT CATTTAACGG TCTGCGTGTC GCTCATGGAT ACACTGCTTC TGATCCCGAT
GCCGTCGTTC TGATGTGCTC TGTCGAACTC TGCAGCCTGC ACCACCATTA CGGCTGGACA
ACCGACAAAG TGATTGCCAA TGCACTCTTT GCAGATGGTT CTGGAGCCGT CATTTGCCGA
TCTTCGAAGA TTGAGGATCG AAAGCCAGCC TATCAACTGA TCCGCAGTGG CTCGTTCCTG
GTGCCCAACA CCAAGTTCGC GATGAGCTGG CGGATTGGAA ATCATGGCTT CGAAATGACT
CTCTCGCAAA AAGTTCCTGC ACTGATTGAG GAAAACCTCG TCAGCTGGCT GACTCCTTTC
CTTGCTCGCG AAGGACTCAC CATCAAGGAT ATCGCTGGTT GGGCCATTCA CCCGGGTGGT
CCGCGTATTC TCGATTCCTG CCTGGCCGCA CTTTCACTTT CCAACAGCCA TGTGGCCCCG
GCCCGTGAAG TGCTCGAAAA GCACGGCAAC ATGTCCTCTT CAACGATTCT GTTCGTACTC
GACAGAATGC GTGAAGAAAG AATCAATGGC CCTGTTGTCG CCCTCGGTTT TGGACCAGGA
CTTGCGATTG AAGCCATGCT TCTGAAAGCT GAAAACATCT GA
|
|---|
| Protein sequence | MAMLISGIGT AAPASRIPQM DAYSAMSNTC CDSDEHRRVM EMIYQGSGVK HRGSVLVGAE
PEDFIRADDR DEFFFYEREN EEDYGPSTQE RMRQYEQHAL PLAIKSSVAA LRDAGQDARE
ITHIVTVSCS GFNSPGVDMG LIEELGLNRN TSRTHVGFMG CHGSFNGLRV AHGYTASDPD
AVVLMCSVEL CSLHHHYGWT TDKVIANALF ADGSGAVICR SSKIEDRKPA YQLIRSGSFL
VPNTKFAMSW RIGNHGFEMT LSQKVPALIE ENLVSWLTPF LAREGLTIKD IAGWAIHPGG
PRILDSCLAA LSLSNSHVAP AREVLEKHGN MSSSTILFVL DRMREERING PVVALGFGPG
LAIEAMLLKA ENI
|
|---|
| |