| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0456 |
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| Symbol | |
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| ID | 9137121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 568788 |
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| End bp | 576635 |
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| Gene Length | 7848 bp |
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| Protein Length | 2615 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | Parallel beta-helix repeat protein |
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| Protein accession | YP_003628505 |
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| Protein GI | 296120727 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCACTTA CAAAACCCAG CCTGGCGTCC GCTCTTCTCT TGGCAATGGC CGCTCCTGCT
GTCGCGCAAT CTGTAGAAGA CGAACTCGGC GTGGCCACCA TGCAGGATTT CAGTGGTGGT
GGCATGCTCA ATGGCACTTA CTTCGATGTT CGCAACCAGT CGAACAGCGG GGTCGGTTAC
CAGCATGGAT TTACGCAGAT TGGTGCTCTG ACACCACTGC TTAATGACGG GCAGTTCCTG
ATTGCTCCAC AGGCGAGATT ACTGATTACA GACACCAGTA AGATCGGCGT GAACGTGGGT
TTGATCGGCC GTGTTTACGA TGCCGGTCGA GATCGCATCT GGGGTGCCAA CGTCTACTAC
GATAACGATG AAACGACTTA CTCGAATCGC TACAGTCAGA TTGGTTTTGG TTTCGAATCG
CTGGGTCAGA ACCTTGATCT GCGGGCCAAC GCCTACCTTC CAACAGGTAG CAGTGACAAA
GTGATTGGGC CCAACGGTCT ATCTAATACA CTGTTTTATA CAGGGAACCA GCTCAATTTC
ACCGGTAGCT ACCTGAGTGA AGAAGCTCTT CGCGGGGCAG ATTTCGAACT GGGAATCCCT
GTCACGCAGA ATATGTCATG GCTGCGCGCT TATGGCGGTG GTTATTTCTA TGATGCGACA
CAAAACAATG TCTCTGGTGT GCGCGGCCGA CTGGATGCTC AGTTGTCAAC AGACCTGACG
GCTGGTGTGA TTGCGACTCA CGACAGTACA TTCAAGACCC GTGTGAATGC CTATGTCGAA
TGGCGCTTTG CCGGCTTTGT GCCCACTGTC TGGTTCCCAC GCCTGAATAC TCAGGAACGC
ATGCTGACTT CTGTGCAGCG TAACTGGCGT GTCTCAACAA CCACTTATAA CACGACAGTT
GCTGTTCCGG TGATCAATCC CCGGGATGAT CAAGCCTACT TCATTACATG GGTTGACAGC
GCCAATCCCA ACGGTGGAGC AGGTACCGGA ACTTATGAAG ATCCATTGAC CCAGCTTCCC
CCGAATTCGC CTCCTGCCGA CCTGATTCTC GTTCGGCAAG GGAACAGCAA CGTTACTCCT
TACAACAATT CCATCACCCT CACCGATTTC CAGCGATTGC TGGGCGAAGG CAAGGTTCAT
CAGATCGAGG GCTATGCCAA CTACGGCCCC TTCTCGATCC CACAGCAGAC CTTCACTCTG
CCCGAGTTTG ATTTCAACGA CCCCAGTCGC AATCCCACAC TCACCAGTAC TGCTGGCAAC
GTCGTCACTC TAGCTAGTAA CAACGAAGTC TCGGCGTTTA ACATTCAGGA CGCACTCGGC
AGCGGGATCA CCAATACTCC TGGCGGTTCG ACCAACTTCC TGCTGCAGAA CTTGAATATC
ACGAACAACA ACACAGCTGG TTCCGCCACT GCCGGTGGAA TCTATCTGTC GAATGTGGAT
GGTACAGGAA CGATTCGGAC AGTTACGACA TCTAACAACC AGGGCTTTGG TACCCGCGTT
GCCGCAGATA CCGATCTTGA CCTGCTGCTG GATGGCCTGG CCAGCACTGG CAACGAACTG
GATAACCTGA ACATCTCCGG TGCATCCGGT GCTGATATTG ATGTCGCACT CACCTCGACC
GGCGGTGCTA ATGCCTTCAC CGGCAGTACG GCAGGTTCCG GTATTGTCAT GTCGATCGAC
AATGCGACCG GTACATTCAC TTCTACGACG CCGCTTACTG CTTCGGGCAA CGCTCTGGAT
GGTATCAGGC TGGAATCAAC CAGTGGCATC CTGGGAACAG CTTTAACGCC CTTCTCACTT
AACGGGGCCA ATCTGGCGAA CAATGGCCGC GATGCACTCA GCCTGATCGG TACAGGTGCC
GGAGCCAACA TCTCGGTGGC GGGTGCTAAC ATCAATGGCA CCAGTGCGGG GCGTCACGGA
ATCAACATCG ATGCAACAGC CGGTGCAAAC GTCACGGCCA ACCTCTCCAA CTCACAGTTC
GGTGGTGCCG GTGCCAACGG CCTGAATGCC GTTCTTGATG CCGCCACAGG AACCGTACTA
CTCACAAATG TTGATGTTTC CAACAACGGG CAAGCCGCGG GCGGAACAGG TCTGCAAGAC
GCGATCAATC TTGATCTTGC CAATGCTTCT TCGCTCGGCC TCGGCTTGAC GGATGTCATC
GGCGATGGTG GTGCCACCCA GGAACGCGGC CTTGTTTACA ACGTCGCTTC CGGCAGTTCG
TTGACCGTCA ACGGTCTTCG CGGATCCTTC GACAACAACC TCGTCAACGC CATTAACGGT
GTGGCCACCG GTGCGGGATC GATCGCAAAC GTCTCGCTCG ATGGGTTTAC TGGCAACAAT
GCCGGTGCGG ACGCAGTGGT CGTCTCCTCG CTGCTCGGTG CGACACAAAA CTTCGAACTT
CTGAACGGCA CTTTCAACCT TGCTACCGGC AACGGATTGA ATTTCACCGC CTCAGGCGCC
TCGACTCTGA ACACAGTACT CGAAGATGTC ACTGTCAACG GCTCTGGTGC TGAAGGCATG
CTGGTTTCCT CGACAGGTGG TTCAACCTTT ACCGGTGTCA TCCAGGATTC GTTCCTCACG
GGTTCGACGC TCAGCGGCCT CAATGTCTCT GTGAGCGATG CGAACTCCGT CGCCACCTTT
GGTGCCATCG ACTCGCAGTT CAACGGCAAT GGCGAAGAAG GACTCGTGGC TTCGGCTACG
TCAGGTGGTG AGTTGAACTT CCGCAGTGCC GGCAGCCAGT TTAACGGCAA CGGAACTTCG
GGTGTCTTTG ATGGCGTGAA TGTCACTGCT GACGGTGCGA ACACCATCGC CCGCACACTC
TTCGCCGATT CGGAATCGAA CAACAACACC GGAGATGGCT ACGACTTCGC TGCATCGAAC
GGCGCCTTCA TGACGGCCCG CATCGATACA TCAACTGCCA CCAACAACCA GGGTTTTGGT
GTGCAGATGG CGGGAACAGG GGCAGGCACC ACAGCCGTCC TCCTGATGGA AGGCGACAAC
GACATCAGCG GAAATACGCT GGGTCAATAC AACGCCACGT TCACCAACGT CGATACTGCA
GTCGTCAGCC TCTCGGGTTC GTTTAACAAC GGGCCAGGCG ATGGCGTGAA TGTCAATATG
ACCGGCACGG GTACAGGCAC AGGCCTGGTG TTGCTCAATG GAGCCGCTGG CCAGACCATC
GATGGCAACG CTGGTAACGG CGTCAACATT TCGATGACGA ACCTCCTCAA TGCGGGAGTC
ACCGTCGCAG GTTACGATTC GATCAGTAAT AACACACTCG ACGGCATAAA CATCAATCTG
GATACCATCC TCGGTGCCGC TGCTGTCAAC CTCACCGGGC CAACTGTTCT CTCCACCAAC
GGTGACAATG CCATCGACAT TGCCCTCACC AATGTGGCTC TCGGTGCTTT GCCACCTGGC
GTGGGAACCG ACACTTACTC AGTACTCACT CGTACCGACA ACGATGTGAC CGAACCTCGC
TTGCCAGTGC CGGTTGACCT GGCGCTCAAC ACGCTCGCCA CTTTGCCAAC CGCCGATGGA
ATCGTGATCG ATTCCATGCT GGCCGACACC TCGGGGACTT CCTCCGGCAA TGCAGCAGGG
ATCGCGATTG TCGGTGATAC CGTCACCAAC GGCTCCGGGA CAGCTGGTAT TGTTGTCACA
AACTCGCAGT CGAACACGAC GACAAATGGC GCTGGCCTCC TCGTGAGCCT GCTCAACTCG
ACGACTCCCG GGACAGAACT CAACCTCGAT ATCAACACGA ACAACTTCAG CAACAACGAT
CTCGATGGTG TGCTCGTCAC TCTCGATGCC TCGAACCTCG ACACGCTCAA TATCAGTGAT
AACGTCGATA TCAGTGGGAA TGGTGGTTCC GGTGTTGTCG TTGATCTGAG TAACGGTTCG
ACTGTCGCCA CCACAACGAT CAACAATAAC CTGCTCATCG ACGCCAACGC ACTGAATGGC
ATTCAGCTCG TAGTGAACGG ATCTGACTTC ACGAACGGTG TGGAACTTCG CGGCAACACC
ATCACGGGCT CAGTCGCTGG CGACGGCATT AGTGTCGTTG ATCCCACCAC GACAGCCGGG
CCACTCGTGC TGACCATTGC CGAGAATACG ATCACCGGCA ACGGCGGCAA CGGTGTGAAT
CTCACAGCGA CGACCGGTGG TGATTTCAGC GGCTCGGTGA TTGACGACAA CACAATCGAC
AGCAACCTGG CCAACGGTAT CAACCTGACT CTGGTTAACT CCACAGCCGA CAACTTCCAG
ATCATCAATA ACAGCTCGAT CTCCGGGAAT ACTCTCGACG GGATTAACAT CGATCTCGAC
AACTCGAGCT TCGCCAACTT CCTCATCGAT TCCAACGGCC TCGGTGGGAA CAATCCGACA
CCGATCAGCC AGTTTAATAT CGAGGTCGTC CTTCTCGGTG GCCTCACTCC TTCCCAGCAG
GCCATCTTCT CCCAGGCGGC CGCTCGGTGG TCGCAACTCA TCACAGGTGA TCTGGCCGAC
GTCGACCTGG GTGGCGGCGA TATCATCGAC GATCTCAGAA TCTCCGCCGA AGGTGCCAAT
ATCGACGGCG TCGGCGGGAT TCTCGGCCAA GCCGGACCTA ATGGAATCCG GGCTGGCAGC
AATCTCCCGT ACTCCGGCGG CATGCGATTC GACAGTGCCG ATCTCGCCAA CCTCGAGGCT
AGCGGACAGC TGTTCGATGT CATCCTCCAT GAGATGGGAC ACGTTCTCGG GATTGGCACG
GTCTGGAACC TCCAGGGTCT GTTGCAGGGT GGCGGCACAG CCGATCCACG CTTCACGGGT
GCTCAAGCGA CGGCGGAATA CAACGCCCGC TTCGCGAACG TCGAAACTGG CGTGCCAGTG
GAAAACACCG GCGGCCCTGG AACTCGCGAT TCTCACTGGC GTGAATCGAT TTACGATAAC
GAGTTGATGA CCGGCTTCTT GAACCCCGGT GTGGACAACC CGATCAGCCG CACGACAACA
GCTTCACTGG CCGACCAGGG CTATGTGGTC AACATCAACG CCTCCGATCC CTATTTGCAG
GCTATCACCA GCGGATCCAC TCCATCCAGC CCCTCATCCA CGGCTGAGGT TGTCCGCACA
ACCAACTTCA CTGTCACTCA GGCGATGGCA CCCCATGCGG CTCTGGCCAG CATTGCCAAT
AACGGCCTAA ACGGCATCGA GTTCAACGTC GTCAACAGCA CCATCGGCGG TACGATCAGC
AACAACACCA TCGACGGCCA CATCGGCGGC GACGGTATCC GCATGATCAA CCCCACCAGC
GGCAGCTCAA TCGATATCGT CTACGATGCG AACACCATCA CCAACAACAC AGGTGGTGCG
GGTATCAATC TCGCCGCCAA TTCAACAACG ATCCTGAACC AGACTTTCAC GAATAACACG
ATTGATAACA ACGGCGATCA AGGTGTGAAT CTCGTCCTGG CGGATACCGC TCAGGCGACG
ATGACCTTCA CCGATAATGC TTCGATTTCT GCCAACGGTG CCGAAGGCGT GAACTTCCTC
GTCCAGAATG GTTCGCAGCT CACAACAACC TTTGCCAACA ACCGTGTCAA CAACAACACA
GGTATCGGGA TTAACATTGT TGCTAATGGC ACAAATGCCA ATGCCGTCAA CCTGACGATG
GAAGCGGGAG CCAACCCCAG CCTCGTCAAT ATTGTCGACA ACAACCGCGG GGCGGGTGTC
GCAGTGGCTC TCAGCAACAC CGCCGGGGCT ACGGTTGATA TCTCGGGCAC GACCATCTCG
AACACACAGC TTGGTACGGT CGCAGGTTAC GCTGGCCAGG GTCTCTCGTT GCGGGGTGTC
GGATCGGCCA CTTATGGTGG CATTACCATC GGGGATGCGA CCGACACCAC CGGAACACTG
TTCAACGGAA ACAACGCTGA GGGTATCGAA ATCACCCTCA CTGACAACAC GCTGGCACCG
AATGTGACCG TGCCTTCGAT TGTGGTGCAG AATATCGATT CTTCAGCAAA CGGAAGCCAT
GGCTTCTCGC TCAATACGAG ATCGTTTGCT GATGTCACCG ACGTCTCGAT TACCGGGTCG
ACCTTCAACG CCAATGAAGG GGCTGGTGAT GGTCTCCACT TTGACCGTGA AGCCGACTCG
TTCATCCGCA ATGTGCTGAT CGACAACAAC ATCATCACGG GCAACAGCGA CGGTATTGAT
ATCACCGCCC GTGCCCGCAA TCTCGATGCT GATGTCTACA CGATCACCAA CAACACCATC
GATAACAACC GGGCCCGCGG TATTACTGCC CAGCTGGTGG CGGATGCTGA CCTGCAGGTT
GATATTGATA CCAACTCAAT CCAGAACAAC GGCGGCGACG GGATCCAGTT CTCAGTCAAT
TCCGCTCTTA CCGATACCCC CTTCATCAGC AGTGTGATCA CCAACAATAC GATTGTTGGA
AATGGTAATG ACGGTATTGA CGTTTCAGTG GCTCATTCAC TGTCAATCAC CGACAACACC
ATCAGCGAGA ACACAGCGAA CGGAATTAAC ATTTCCGGTT CGAGCTTCAA TCCGAACACC
AATGCTCAGA CGGTTGACAC GATTGTCAAC AATACTATCG ATGCCAACGG TTCCAACGGG
ATCCTGGTTA CATCTGGTGG CATCAACAAC CTTCAGATTG CCGACAACGA CGTTACCAAT
TCTGGTAACG ACGGTATCCA GTTGAATTCC AGTGGAGCTA TACTGACTGC CACGATCGAC
AACAACCTGA TTGCTCTCAA CACGGGTGAC GGTCTGCAGT ATGTCGCCAC CGGCTCTGGA
AATTTGCCGC TTGGGCCCAA CAACGTCGTT CTGACGAACA ATGATATTGC TCAGAACACA
AGACGCGGGA TCAACCTGCT CAATCGCGGG GACGCTAACA CAGTCTTCAC GATTGGTGAT
GGAACGATTG GCAACCAGAA CCAGGTTCGC CGGAACCAGT TGGAAGGTAT CTATGTTGTC
AACACGGCCT CGACGACACA GGACGCCGAC GCGAACGCCA ATACCGCGTT GCTGGCAAAC
GGTTCCATCT TTGCTTCTCC AAATCTGCAA CTGAACGTAG ATACGAATGA AGTCACGGCT
AACGGACGGA TCAGTAACCC GGCGGCAGTC TTTGATACCA CGGGCCTGGT ATTGCGAGTT
GGGACGAGTG ATGGTGGGGA TGGTTTTGAT GATGAGGGTG GGTTTGCCGC TGGCGGGCGA
GGTGGTGTGA TTGCCAGCGT TACAGATAAC ATCTTCGGGG GCCACTTCGG TGCAGACGTG
ACCTTTGAAT CGTTTGTTTC CACATCAAAC CCTGGTGCGA CTGGGGGCAC TTGGAACTAC
GACAACACAG CCGTTTTTAA TCCTGCAAAT AACTTGTTCA CGCCGACGAA CTACCAATCT
GACCCCCTGG CCCGCCTTGA TTTGACTTTC ACCGGGAACA CCGGACAAGG CATCATCGCC
ACTCGAACCG GGGCAAGTTA CACCAACTCT GAAGCAGTGT TCAAATCGCG TACAACCGAT
CCGGGTGGGT CTACTGCTCC AGGTGCTCCT GGCAGTGTTA ATGGTCCATT CGGCAGTGAC
ACCCGTGCCC GTAATGCCCA ACGTCTGGCA GCCCGGTTTA CGTTACCACC GACGATTAAT
ATTCCTGCCA ATGGTGGCTC TGATAACTTC CTGTTCCCAG GTCTTGGAGA AAGCACCTTC
CGTGTCAACG CGAATGCCAA TGCGGCCAAC GTTGGATTTG GTGGAACCCT ATTCATCTTT
GATGCCCCCG CTTATATCGG CACAGGATCA GCAGGGGGAG TTGGAGCTAC GGGTGGTGGC
CCATTTGGTA TCGATAACAT GCCATTCGGC TGGGGAAGAC TCCCATAA
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| Protein sequence | MPLTKPSLAS ALLLAMAAPA VAQSVEDELG VATMQDFSGG GMLNGTYFDV RNQSNSGVGY
QHGFTQIGAL TPLLNDGQFL IAPQARLLIT DTSKIGVNVG LIGRVYDAGR DRIWGANVYY
DNDETTYSNR YSQIGFGFES LGQNLDLRAN AYLPTGSSDK VIGPNGLSNT LFYTGNQLNF
TGSYLSEEAL RGADFELGIP VTQNMSWLRA YGGGYFYDAT QNNVSGVRGR LDAQLSTDLT
AGVIATHDST FKTRVNAYVE WRFAGFVPTV WFPRLNTQER MLTSVQRNWR VSTTTYNTTV
AVPVINPRDD QAYFITWVDS ANPNGGAGTG TYEDPLTQLP PNSPPADLIL VRQGNSNVTP
YNNSITLTDF QRLLGEGKVH QIEGYANYGP FSIPQQTFTL PEFDFNDPSR NPTLTSTAGN
VVTLASNNEV SAFNIQDALG SGITNTPGGS TNFLLQNLNI TNNNTAGSAT AGGIYLSNVD
GTGTIRTVTT SNNQGFGTRV AADTDLDLLL DGLASTGNEL DNLNISGASG ADIDVALTST
GGANAFTGST AGSGIVMSID NATGTFTSTT PLTASGNALD GIRLESTSGI LGTALTPFSL
NGANLANNGR DALSLIGTGA GANISVAGAN INGTSAGRHG INIDATAGAN VTANLSNSQF
GGAGANGLNA VLDAATGTVL LTNVDVSNNG QAAGGTGLQD AINLDLANAS SLGLGLTDVI
GDGGATQERG LVYNVASGSS LTVNGLRGSF DNNLVNAING VATGAGSIAN VSLDGFTGNN
AGADAVVVSS LLGATQNFEL LNGTFNLATG NGLNFTASGA STLNTVLEDV TVNGSGAEGM
LVSSTGGSTF TGVIQDSFLT GSTLSGLNVS VSDANSVATF GAIDSQFNGN GEEGLVASAT
SGGELNFRSA GSQFNGNGTS GVFDGVNVTA DGANTIARTL FADSESNNNT GDGYDFAASN
GAFMTARIDT STATNNQGFG VQMAGTGAGT TAVLLMEGDN DISGNTLGQY NATFTNVDTA
VVSLSGSFNN GPGDGVNVNM TGTGTGTGLV LLNGAAGQTI DGNAGNGVNI SMTNLLNAGV
TVAGYDSISN NTLDGININL DTILGAAAVN LTGPTVLSTN GDNAIDIALT NVALGALPPG
VGTDTYSVLT RTDNDVTEPR LPVPVDLALN TLATLPTADG IVIDSMLADT SGTSSGNAAG
IAIVGDTVTN GSGTAGIVVT NSQSNTTTNG AGLLVSLLNS TTPGTELNLD INTNNFSNND
LDGVLVTLDA SNLDTLNISD NVDISGNGGS GVVVDLSNGS TVATTTINNN LLIDANALNG
IQLVVNGSDF TNGVELRGNT ITGSVAGDGI SVVDPTTTAG PLVLTIAENT ITGNGGNGVN
LTATTGGDFS GSVIDDNTID SNLANGINLT LVNSTADNFQ IINNSSISGN TLDGINIDLD
NSSFANFLID SNGLGGNNPT PISQFNIEVV LLGGLTPSQQ AIFSQAAARW SQLITGDLAD
VDLGGGDIID DLRISAEGAN IDGVGGILGQ AGPNGIRAGS NLPYSGGMRF DSADLANLEA
SGQLFDVILH EMGHVLGIGT VWNLQGLLQG GGTADPRFTG AQATAEYNAR FANVETGVPV
ENTGGPGTRD SHWRESIYDN ELMTGFLNPG VDNPISRTTT ASLADQGYVV NINASDPYLQ
AITSGSTPSS PSSTAEVVRT TNFTVTQAMA PHAALASIAN NGLNGIEFNV VNSTIGGTIS
NNTIDGHIGG DGIRMINPTS GSSIDIVYDA NTITNNTGGA GINLAANSTT ILNQTFTNNT
IDNNGDQGVN LVLADTAQAT MTFTDNASIS ANGAEGVNFL VQNGSQLTTT FANNRVNNNT
GIGINIVANG TNANAVNLTM EAGANPSLVN IVDNNRGAGV AVALSNTAGA TVDISGTTIS
NTQLGTVAGY AGQGLSLRGV GSATYGGITI GDATDTTGTL FNGNNAEGIE ITLTDNTLAP
NVTVPSIVVQ NIDSSANGSH GFSLNTRSFA DVTDVSITGS TFNANEGAGD GLHFDREADS
FIRNVLIDNN IITGNSDGID ITARARNLDA DVYTITNNTI DNNRARGITA QLVADADLQV
DIDTNSIQNN GGDGIQFSVN SALTDTPFIS SVITNNTIVG NGNDGIDVSV AHSLSITDNT
ISENTANGIN ISGSSFNPNT NAQTVDTIVN NTIDANGSNG ILVTSGGINN LQIADNDVTN
SGNDGIQLNS SGAILTATID NNLIALNTGD GLQYVATGSG NLPLGPNNVV LTNNDIAQNT
RRGINLLNRG DANTVFTIGD GTIGNQNQVR RNQLEGIYVV NTASTTQDAD ANANTALLAN
GSIFASPNLQ LNVDTNEVTA NGRISNPAAV FDTTGLVLRV GTSDGGDGFD DEGGFAAGGR
GGVIASVTDN IFGGHFGADV TFESFVSTSN PGATGGTWNY DNTAVFNPAN NLFTPTNYQS
DPLARLDLTF TGNTGQGIIA TRTGASYTNS EAVFKSRTTD PGGSTAPGAP GSVNGPFGSD
TRARNAQRLA ARFTLPPTIN IPANGGSDNF LFPGLGESTF RVNANANAAN VGFGGTLFIF
DAPAYIGTGS AGGVGATGGG PFGIDNMPFG WGRLP
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