Gene Plim_0445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0445 
Symbol 
ID9137109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp556296 
End bp557300 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content54% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003628494 
Protein GI296120716 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGTTT CGATTGTCGT TCCGATCTAT AACGAACTCG AAAACCTTCC CCTTTTGCAT 
GCCGCCATCA TGCGGGTGAT GGAGCCCCTG GTACACAGTT GTGAGTTAAT TCTCATCAAC
GATGGTTCCA CCGATGGTTC TACCGAAGTC ATGGATCAAA TTGCCGCGGC AGATTCCCGG
GTGAAGCTGA TCGAGTTTCG CAAAAATTTT GGCCAGACGG CTGCGATGCA GGCGGGGATT
CAGGCAGCCA CTGGTGACGT CATTGTCACC ATCGATGGCG ACCTGCAGAA CGAGCCCGAA
GACATTCCAA TGATGCTGGC GAAAATCGAG GAAGGTTACG ATCTCGTGCA TGGCTGGCGT
AAGAACCGGC AGGATGCAGT TCTCCACCGG AAACTTCCGT CAGTTTGTGC CAACTGGCTG
ATTGGGAAAG TGACTGGTTT CCCGGTGCAC GACCTGGGTT GCACACTCAA GGCCATTCGC
AGCGAAATCG CCAAGGAACT ACAGCTTTAC GGCGAAATGC ATCGCTTCAT CCCCATTCTC
GCCAGACAGC GCGGGGCAAG ATGCATCGAA GTCGTTACGA GGCATCATGC CCGGCGTTTT
GGTGTCTCGA AGTACGGCCT GGGCCGCGTC ACTCGCGTGC TGCTGGATCT GGCAACCGTC
AAATATCTGA TTCAGTACGC CGTCAGCCCC ATGAAACTCT TTGGGATGAT GGGATTAATG
GCCATGTTCA CCAGCGGTCT GGCAGCATTC GCCAGTATCG GCCTTAAGCT GACCTATAAC
TATGATATGA CTGGCAACCC CCTGCTGCTG TTGAGTGCTG TCTCCGGGTT GGCGGCGATT
CAGTTTGTCT TTCTGGGTTT ACTGAGCGAA CTCTGCTCAC GCATCTATTT TCAGGTGCAG
AACGTACAGA CGTATGCTGT CCGCAAAACG ACAAATTTTG AGACAGTTTC ACTCGCCATT
TCACCGGCTC CACTACTGGA TCCTCGCTCA CGCCGGGCTG CCTGA
 
Protein sequence
MHVSIVVPIY NELENLPLLH AAIMRVMEPL VHSCELILIN DGSTDGSTEV MDQIAAADSR 
VKLIEFRKNF GQTAAMQAGI QAATGDVIVT IDGDLQNEPE DIPMMLAKIE EGYDLVHGWR
KNRQDAVLHR KLPSVCANWL IGKVTGFPVH DLGCTLKAIR SEIAKELQLY GEMHRFIPIL
ARQRGARCIE VVTRHHARRF GVSKYGLGRV TRVLLDLATV KYLIQYAVSP MKLFGMMGLM
AMFTSGLAAF ASIGLKLTYN YDMTGNPLLL LSAVSGLAAI QFVFLGLLSE LCSRIYFQVQ
NVQTYAVRKT TNFETVSLAI SPAPLLDPRS RRAA