| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0443 |
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| Symbol | |
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| ID | 9137107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 551257 |
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| End bp | 554973 |
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| Gene Length | 3717 bp |
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| Protein Length | 1238 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase, beta subunit |
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| Protein accession | YP_003628492 |
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| Protein GI | 296120714 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAACC CCGCCCAGCG TGTGATTGAG ACTCATGAAA CTCGCCATTT TGGATCCATT
CGTGGTGAGT TTGCCATCTC TGAACTCACA CAAATCCAGA CAGCTTCTTA CCATCGCTTT
CTGCAACTTG AGAGTGAGCC ACGTGAGCGA GCTGATGACG GTCTGGAGGC GATTCTTCGG
GAAGTCTTCC CCATCGAGAG CTACGATCAG AAGTATCGCC TGGAGTACAT CAAGTACGAA
CTCGGTAAGC CTCGCTATAC ACCACTCGAG TGCCGCCAGC TTCGCTTAAC CTACGGACGT
CCTTTCCGGG TCTGGCTGCG GCTCATGAAG GAGCAGCCGC AGGAAGAAGA AGTTTATCTG
GGTGATTTGC CCATCATGAT CGGTGGTGGC GAATTCATCA TCAACGGTTC CGAGCGAGTT
GTTGTCAGTC AGTTGCACCG CTCTCCCGGT GTTGACTTTG TGATGTCAGC CGAACCCGGT
GAAAAGAAGA CTTTCTCCTG CCGTGTCATT CCCGAGCGTG GTAGCTGGAT CGAGCTGAAT
ATCGGCAAGC GGGATACTCT GAATGTCCGC ATCGATCAGT CAGGCAAGTT CAGTGCGATG
ACCTTCCTGC GGGCGATGGA TCCTGCGTAT GGTCGTACGA AAGATCTGGT CAAGCTGTTC
CACAATGTGG TGACATTCAA GGTCAGCGAC AGCCACTTCG TGGAGCACGT CGCTGGCAAG
CACGCTGCGG ACGATATCGT TTATCCAGCC GGTCACGAGC GGATGGGCGA GATCATCTGC
GAAGCCTGTC ATGTCATCAC GAAGCCACTG GCTGAAGAGA TTAAGGAATC GGGGATCAAG
ACAGTCGATG TCGCCGAGAA GTCGGATGAT CCCATCATTA TGGATAGTCT GATTGAGGAT
TCGACCGCGA GCCATGAAGA CGCGCTGCTT CGAATCTATC AGCGTCTGCG TCCAGGCAAT
CCACCTCAGC TGGAAAAGGC CATCGAACTC TTCAAAGAGA AGTTCTTTGA CGTGAATCGA
TATCGAATTG GTCGCGTCGG TCGTTTCCGC GTGAACCGTA AATTTGATCA GGATGTGCCT
GATACCGAGA TGACTCTTCG TCCCGAAGAT ATCATCAACT CCATCCGGTA TGTGATGAAG
TTGCGGACGG GTGATGCGAC AGCCCATGTC GATGATATCG ATAACCTGGG CAATCGGCGC
CTGAGAACCA TTGACGAACT CGCACAGGAA GAACTTCGCA AAGGCTTCCT GAAGCTCCGC
CGCACCGTTC AGGAGCGAAT GAGCCTCAAA GATGTGGAGG AAATGTCACC ACGCTCTTTG
ATCAACCCGA AGAGTGTCTC GGCAGCGATT GATTTCTTCT TCGGCCGTGG CGAACTCTCA
CAGGTGGTGG ATCAGACCAA TCCTCTGGCC ACGTTGACTC ACGAGCGCCG GCTCAGTGCC
CTTGGCCCGG GCGGCTTGAA CCGCAAGCGG GCAGGCTTTG AAGTTCGCGA CGTACATATT
TCGCACTATG GCCGTATCTG CCCGATTGAA ACACCGGAAG GTACCAACAT CGGTCTGATT
TCAAGCCTCA GCATTTTTGC GAAGGTCGAT GATTACGGTT TCCTTATCAC CCCATATCGC
AAGGTTGTCG ATAAGAAGGT GACTGAAGAA ATCGTCTGGC TGCGAGCCGA CGAAGAGTCG
CATGTTTACA TCGCCCCGGC TGATACGCCG GTGCAGGACG ACAAGATGCG TGATGAACGC
GTCATGTGTC GTCACCACAA CGACTTCCTC TGGCTGCCCG CTTCTCAGGT GAACTACATC
GACGTCGCAC CTTGCCAGAT GGTGGGTGTC TCGGCCGGTT TGATTCCGTT CCTTGAGCAC
GACGATGCCA ACCGCGCACT GATGGGTTCA AACATGCAGC GGCAGGGCGT TCCTCTGCTG
ATTGCGGAAC CACCTCTGGT AGGAACTGGT CTTGAAGGAC CGGTTGCCCA GAACAGCGGG
ATGGTTTTGA GAGCCGAGAA GTCAGGTAAA GTGACTTACG TCGATGGGGA TTGCATCGAA
ATCGATGGCA AACGCACACC ACTTCGCAAG TACACAGGCC TCAATGAGCG CACCTGTCTG
AACCAGACTC CTGTCGTCAA GGTGGGTGAT AAGGTCAAGA AGGGTGATAT CCTTGTTGAC
AGTGCTGCTG TGGGTGATGG TGAGTTGGCA CTGGGACGAA ACGTGCTCGT CGCGTTCATG
TCCTGGGAAG GCTTCAACTT TGAAGACGCG ATCATCCTTT CGGAACGTCT CGTGAAAGAA
GACGTTTACA CGTCAATCCA CATCGATGAA TTCGATGTGG AAGTTCGCGA AACCAAACTG
GGTCGCGAAG AATTCACTCG CGACATTCCC AACGTGAGCG ATAAGGCTCT GCGTCATCTG
GATGATGACG GTGTGATCCA TGTCGGTACA CGCGTTGAGC CAGGCGATAT TCTGGTAGGT
AAGGTTTCGC CCAAAGCCAA GACCGAACTG ACACCGGAAG AAAAGCTCCT TCACGCGATC
TTCGGACGGG CCGGGGAAGA CGTGAAGAAC GAATCACTGG AAGTCCCCAG TGGTGTGGAA
GGGATCGTCA TTCATACAGA GAAGTTCTCT CGTCGAATGA GTCTCTCGGA AACCGAACGT
AAGAAGTTCG AAACTGACCT GAAGCGTGTG GAAGAGTCTG GAAATGATTT GATTGCAGCT
GCTTTCAAGA CCTTCCTCAC TCATTTTGAA ACAGCTCTGG AAAAGAAACT GCAGGATGAC
GATGGACGTG ATCTTGGCAA GCTCGATGAT GCCAAGTTCC TGGCCACTTA TGCGGAGTCA
TTCCTGCATC GTTTTGAAAC CATGGATCTC CGCAGTCCTC AGAAGAAGGC CGACTGCAAG
AAGGCCATCA AGGAATTCTG GGGCCCGGTG GAAGAAGCGA TTGATGATCG TGACCGTAAG
CTGAACACCA TGAAGCGTGG CGATGAGTTG CCCAGCGGTG TGCTGCAGAT GGTGAAGGTC
TATGTCGCTC AGAAGCGGCA GATCTCTGTC GGTGACAAGA TGGCCGGTCG TCACGGCAAC
AAGGGGGTGA TTTCCAAGGT GCTGCCAGTC GAGGATATGC CATTCCTCGC CGATGGAACA
CCGGTTGACA TCATTCTCAA CCCACTGGGT GTGCCCAGCC GTATGAACGT GGGGCAGATT
CTCGAAACTC ATCTGGGCTG GGCTGCAGCC AAGCTGGGCT TCCGAGCGAA ATGCCCTGTC
TTTGATGGAC CGGCTGAAGA AACGATTCGC GAACTGCTGA AGCAGGCTGG TCTTCCCGAA
GACGGAAAGG CACAGTTGCT GGATGGCCGC ACCGGCGAAC CGTTCGAGCA GAAGACGACT
GTGGGCTACA TCTACATGCT CAAGCTGCAT CACCTGGTCG AAGATAAAGT TCATGCCCGC
GCCACTGGCC CTTACTCTTT GATTACTCAG CAGCCGCTGG GTGGTAAGGC TCGTTTTGGT
GGTCAGCGAT TTGGTGAGAT GGAAGTGTGG GCTCTGGAAG CCTACGGTGC TGCCTATATT
CTGCAGGAAT TGCTCACTGT GAAGAGCGAC GATGTGGAAG GCCGCACGAA GATCTACGAA
TCGATGGTCA AGGGAGAAAA CACTCTCGAA GCCGGTACAC CTGCCAGCTT TGAAGTGCTC
AACAACGAAA TTCGTGGTCT CTGCCTGAAC ATGCAGTTGG AGAAGAGCCT CACATAG
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| Protein sequence | MPNPAQRVIE THETRHFGSI RGEFAISELT QIQTASYHRF LQLESEPRER ADDGLEAILR
EVFPIESYDQ KYRLEYIKYE LGKPRYTPLE CRQLRLTYGR PFRVWLRLMK EQPQEEEVYL
GDLPIMIGGG EFIINGSERV VVSQLHRSPG VDFVMSAEPG EKKTFSCRVI PERGSWIELN
IGKRDTLNVR IDQSGKFSAM TFLRAMDPAY GRTKDLVKLF HNVVTFKVSD SHFVEHVAGK
HAADDIVYPA GHERMGEIIC EACHVITKPL AEEIKESGIK TVDVAEKSDD PIIMDSLIED
STASHEDALL RIYQRLRPGN PPQLEKAIEL FKEKFFDVNR YRIGRVGRFR VNRKFDQDVP
DTEMTLRPED IINSIRYVMK LRTGDATAHV DDIDNLGNRR LRTIDELAQE ELRKGFLKLR
RTVQERMSLK DVEEMSPRSL INPKSVSAAI DFFFGRGELS QVVDQTNPLA TLTHERRLSA
LGPGGLNRKR AGFEVRDVHI SHYGRICPIE TPEGTNIGLI SSLSIFAKVD DYGFLITPYR
KVVDKKVTEE IVWLRADEES HVYIAPADTP VQDDKMRDER VMCRHHNDFL WLPASQVNYI
DVAPCQMVGV SAGLIPFLEH DDANRALMGS NMQRQGVPLL IAEPPLVGTG LEGPVAQNSG
MVLRAEKSGK VTYVDGDCIE IDGKRTPLRK YTGLNERTCL NQTPVVKVGD KVKKGDILVD
SAAVGDGELA LGRNVLVAFM SWEGFNFEDA IILSERLVKE DVYTSIHIDE FDVEVRETKL
GREEFTRDIP NVSDKALRHL DDDGVIHVGT RVEPGDILVG KVSPKAKTEL TPEEKLLHAI
FGRAGEDVKN ESLEVPSGVE GIVIHTEKFS RRMSLSETER KKFETDLKRV EESGNDLIAA
AFKTFLTHFE TALEKKLQDD DGRDLGKLDD AKFLATYAES FLHRFETMDL RSPQKKADCK
KAIKEFWGPV EEAIDDRDRK LNTMKRGDEL PSGVLQMVKV YVAQKRQISV GDKMAGRHGN
KGVISKVLPV EDMPFLADGT PVDIILNPLG VPSRMNVGQI LETHLGWAAA KLGFRAKCPV
FDGPAEETIR ELLKQAGLPE DGKAQLLDGR TGEPFEQKTT VGYIYMLKLH HLVEDKVHAR
ATGPYSLITQ QPLGGKARFG GQRFGEMEVW ALEAYGAAYI LQELLTVKSD DVEGRTKIYE
SMVKGENTLE AGTPASFEVL NNEIRGLCLN MQLEKSLT
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