| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0410 |
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| Symbol | |
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| ID | 9137069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 515847 |
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| End bp | 517544 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003628459 |
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| Protein GI | 296120681 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.430305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGATG ATTACCTTCG CAAACTGATC AAGGATGGTC TCATCAGTAA GGATCAGCTT
GGTGAAGCAG AGGACCTCGG CCGCAGTATG GGGATCTCGA TTTCTGACGC CCTCATTAAA
CTGGGGTACG TGGGAGCGAG CGAGTTGGGC CAGAGGCAGG CCGCCGCTTT CGGCTACCAG
TATGTCAGTC TGGACGGGAT GGAGATCTCC AGTGGTGTGA TCGGGCTGCT TCCCGAATCG
GTTGCTCGCG AAAACATCGT GATCCCGCTG GCGATGGACG ACGACCGGCT GAAGATCGCG
ATCAGCGACC CGATGAACTA TGAGGTGCTT GATAAACTCC GATTTCTGCT GAACCGTGAT
ATCGATCTGG CAGTGGCCTC GAAAGAATCG ATTCAAAATG CCATCAATCG GCATTATGGC
CAGAGTGAAA CGGAATCTGT CGATTCGATT CTGCTGGAGT TCACCGAAAC AGCCATTGAT
TTTACGGCGA CGGATATTCC TTCATCGGCT GCCACGACTG CGGAGGAGAA TGCCCCGATT
GTCCGCCTGG CAAATCTGAT TGTCAGTGAA GCCGTGAACA TGCGTGCCTC CGACATTCAT
ATTGAGCCTT TTGAAGACAA GGTGCGTGTT CGCTACCGAA TTGACGGAGT GCTGGTCGAA
CGAGACAGCC CCCCCAAGCG GCTGCATTCG GCACTGATTT CCCGTTTCAA GATTATGGGA
AATATGGATA TTGCCGAGAA GCGGCGGCCC CAGGACGGAC GCATCAAGAC CCGCATCAAC
GGCCAGGACT TTGACCTGCG AGTCAGCATT CTCCCCACTG GTTTTGGCCA GGCCATCGTG
ATGCGAATCC TCGATCGCAA CAATATTAAA GTGGGGATCC GCAGCCTGGG GTTGTCGGAC
GAGAATTACC GCAGGTTCAA CAACACGATT CGACGTCCGA ACGGAATCTT CCTGGTGACA
GGGCCCACCG GTTCCGGGAA GACCACCACT TTGTACAGTG CCCTGGGCGA AATGAACCGG
CCGGACAAAA AGATCATCAC GGCTGAAGAC CCTGTCGAGT ATTACCTGCC CGGAATCAAT
CAGGTCGAAG TGAAGGCCGA CATTGGATTG AACTTTGCAC GCATTATTCG TGCGATGTTG
CGGCAAGCTC CGAACATCAT TCTGGTGGGG GAAATTCGAG ATGCCGAGAC CGCTCAGATG
GCAATTCAGG CTTCTTTAAC TGGACACCTG GTTTTCAGTA CTCTTCACAC GAACGACGCA
CCCAGTTCTA TTACACGTCT GATTGACATG GGGGTCGAGC CATTTCTGGT GGCATCGTCG
ATTGTGGCCA TTATGGCGCA GCGACTGGTG CGTACCGTCT GTCCGAAGTG CAAAGAACCT
TATGCACCCG ACCCCAGCGA AATTGCACAC TTTGCCCTGA CACCAGAACA GGTTGCAGGA
GCGAACTTTA TGCGAGGCAA GGGTTGTAAT CACTGCCAGC AATCAGGTTA TCGAGGTCGA
GCCGCTGTGT TCGAGCTGAT GATGATGAAC TCCACATTGC GTGAAATGAC ATTTAAAGGG
GAACCTTCCC AGTCACTGCG GAGACAGGCG CGACTGTTCG GCATGAAGAC GCTGGTCGAA
GATGCCGTCG ACAAGGCCTT GATCGGAAAG TCAACGCTGC TTGAGGCTTA CAAGCTTGAC
AAGGGGAGCG GACACTAG
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| Protein sequence | MADDYLRKLI KDGLISKDQL GEAEDLGRSM GISISDALIK LGYVGASELG QRQAAAFGYQ
YVSLDGMEIS SGVIGLLPES VARENIVIPL AMDDDRLKIA ISDPMNYEVL DKLRFLLNRD
IDLAVASKES IQNAINRHYG QSETESVDSI LLEFTETAID FTATDIPSSA ATTAEENAPI
VRLANLIVSE AVNMRASDIH IEPFEDKVRV RYRIDGVLVE RDSPPKRLHS ALISRFKIMG
NMDIAEKRRP QDGRIKTRIN GQDFDLRVSI LPTGFGQAIV MRILDRNNIK VGIRSLGLSD
ENYRRFNNTI RRPNGIFLVT GPTGSGKTTT LYSALGEMNR PDKKIITAED PVEYYLPGIN
QVEVKADIGL NFARIIRAML RQAPNIILVG EIRDAETAQM AIQASLTGHL VFSTLHTNDA
PSSITRLIDM GVEPFLVASS IVAIMAQRLV RTVCPKCKEP YAPDPSEIAH FALTPEQVAG
ANFMRGKGCN HCQQSGYRGR AAVFELMMMN STLREMTFKG EPSQSLRRQA RLFGMKTLVE
DAVDKALIGK STLLEAYKLD KGSGH
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