Gene Plim_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0352 
Symbol 
ID9137011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand- 
Start bp434424 
End bp434987 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628402 
Protein GI296120624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.642542 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGAA TTACCATGAG CGATTATCGC CGGAACTACA ACGGCCGAAC GTTCTTCTTC 
ACGGTCGTAA CAGAACGCCG CCGTCCGATT TTGACGACCG ATACCGCCCG TCACCATTTG 
CGTCAGGCGA TACGCACTGT TCACAGAAAG CATCCCTTTG AGATTGTTGC GATCGTGCTG 
CTTCCCGATC ACCTGCACAC TGTCTGGACA TTGCCCCGCA ACGATGTTGA CTATTCCCGC 
CGCTGGAGGT TGATCAAAAT GTATTTCACC AAGGCATGGC TTCAAGAAGG GAATGCCGAT 
GTCACGCCCA GCACCAGCCG CCAGTCGAGA GGTGAGCAGG CGATCTGGCA ACGACGCTTT 
TACGAACACA CTTGTCGCGA CGAAGAGGAT TTGAAACGCT GCATCGATTA CATCCACGCC 
AATCCGCTGA AGCACGGCTT GGTGAACCGC GTTGCCGATT GGCCTTGGAG CTCATTTCAT 
CGGTTCGTGC AAGCTGGTGA ATATACCCTG GAGTGGGGCC GCACGATTTC ATGGGACAAC 
GACGAATTCA GTGATTTTGA GTGA
 
Protein sequence
MIRITMSDYR RNYNGRTFFF TVVTERRRPI LTTDTARHHL RQAIRTVHRK HPFEIVAIVL 
LPDHLHTVWT LPRNDVDYSR RWRLIKMYFT KAWLQEGNAD VTPSTSRQSR GEQAIWQRRF 
YEHTCRDEED LKRCIDYIHA NPLKHGLVNR VADWPWSSFH RFVQAGEYTL EWGRTISWDN 
DEFSDFE