| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0288 |
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| Symbol | |
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| ID | 9136943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 363897 |
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| End bp | 366428 |
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| Gene Length | 2532 bp |
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| Protein Length | 843 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | DNA photolyase FAD-binding protein |
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| Protein accession | YP_003628338 |
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| Protein GI | 296120560 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACATC AAGAACTTAC ATCGATGCTC TCGGGCCTTC CTGAGCATCT TCAAGAGCGG
ACACGGATAC TCTCTTCGCC ATTGAGTTTG TCGACGGCCG CAAATGATCC GGATCAAGCC
ACAACCCATG GTGACTTTGT CCTGTACTGG ATGCACCATT CACTCCGGGG CCACGAAAAC
CCGGCACTTG ATGTCGCCAT TCATTTGGCA CATTGGCTCG AGAAGCCACT GCTGGTTTAT
CAGGGGCTCT CGGAAGATCA CCCCTATGCC AATGATCGCA GGCATACGTT CATTCTCCAG
GGAGCACGCG ATGTTCATGC GGAACTGGCC GAGCAGAAGA TTTCCTCGGT GCTCCATGTC
GCGCGGGCCG AAGATCGCGG GCCTCACCTC AAGACACTGG CTGCTCACGC GGCGGTTCTC
GTGACAGATG ATGTCCCGAC CGCTCCGACG ATTCACTGGC GCAATCGACT GGCTGCCTCC
ATCAAGACGC CGATTGTGTG TGTCAATGGT GCGTGCATTG TGCCGCCCCA ATTGGTCAAG
CGGGCCTTTG ATCGCGCCTT TGCCTATCGA GAAGCAACGG CATGGCTCTA CAAAACCCGC
AATACCCGCC CGTGGCCAGT GCTTCGTTAT GCAGGGAAGC CGTTTCCACT TGATCAGCGA
CCCTTCCAAT CAGTCGATCT GCAGCAGACG TCGATTGCCG ATCTGCTGGC AATCAGCCAG
ATCGATCACT CGGTTGGTCC TGTTCAACAT ACCGTGGGAG GTTCTCAGGC AGGTTATACC
CGCTGGGAAA ACTTCAAAAA GCAGGGATTG AGACGCTATG CCGATCAGCG GAACGATGCC
CTCAAGGATG GCGTCAGCCG GATGTCGGCC TATCTGCATT ACGGCATGGT TTCCCCCTTC
ACACTGGTGC GAGATTGTTT TGAAGTCGGT GGCGCCAGTG CCGAGAAATA TCTCGATGAA
CTCCTCATCT GGCGTGAACT CGCCTGGTGC TTTTGCCACT ACCGCACAGA TCACGAGGCT
CTTTCAGCAC TCCCCACCTG GGCTCGACAG GCTTTGAAGG CTGGAGAAGC CGATACCAGG
CCTGCTTTGT ACGATGAAGA AACGCTGGCT CGTGCGCAGA CGCATGATCC CCTCTGGAAT
GCGGCTCAAA TGTCACTCCT TCGCCAGGGA GAACTCCATA ACAATGTGCG GATGACCTGG
GGCAAAGCCA TTCCTCTCTG GACACGCACG ACCGAAGAGG CCTTGCGACT GCTGTTCGAT
CTTAATCATC GATACGCCCT CGATGGCTGC GATCCGGCAT CGTATGGCGG TCTGTTGTGG
TGTCTGGGAC AGTTCGACAG GCCATTTACT CCCGAAGAAC CCATCTTGCG GAGTATTCGA
GGACGTTCGA CGGCCGAGCA TGCCCGCCGG TTGAACCCCG AGAAGTATCT GGCGAAAACC
TCCCGTCGCC TGACAGCGGA ACCTGTCAAA GTGGCTGTGA TTGGTGCCGG CATCACGGGA
CTGATGGCAG CCCGCACGCT GTCCGATCAT GGCTTCGAAG TGGAGGTCTT TGAAAAGAGC
CGTGGGCTGG GCGGACGCAT GGCCACTCGT CGCCTTCCCG AAGGTGGTCA GTTCGATCAT
GGCTGCCAGT ACATCACGGC GAAGTCGCCT CAATTTGAGA GATCCTTACG CTCATGGGAG
AGCCAGGGGC TGATCACACC CTGGCAAGGG CTCTTGGCAG CACAGCGGAC CGATGGTTCG
TGGAAAGAAC TCGCAGCGAA CGGGCCTCGC TATGTGGGGC TTCCCGGCAT GACCTCGATG
GCCCGGCATT TAAGTCAGGG TCTGAAAGTT CATCAGGAGG TGCAGATTCA AAAAGTCGAG
CGGATCGCCA ACCAGTGGCA ACTGCAGAGC ACACAGGGAA CTGTTGCAGG ACCTTTCGAT
CAACTCATTC TGGCAATACC CGCCGGACAG GCTGCGCGAC TTGTGGGTGA ACATCCTTTG
GCGGAAACTC TGGCCAGAAT TCCCATGGAT CCCTGCTGGA CCGTGATGGC CACTTTATCT
GATCGACTCA ATCTTCCCTT TGATGGTTAC CTGAGCCACG CGGCATTGGC ACCGGCTGTG
GGGTGGGCAG CGCGAGATAC ATCCAAACCC AAACGGCCGA CAGATGCCGA ACGCTGGGTG
TTGCAGGCGA CACCGGCATG GACGAGGAGT CACCTCGACC TTTCCGCAGA TCAGGTGGCC
ACCGAACTCT GGCACCACTG GTGTGAGCAG ATCAGCCTTC AGTCCCACAG CCTTCAGGTC
CACAGGACGC CCGAGCTTGT AGCACACCGC TGGATGTTTT CCACGCTGGA TCCCACGAAG
GTTCCTGCGG AGATTTACCA GAAGCTGTCG ATCGAGCGCG CCTTGCATGA TCCCGAGCAT
GGCCTGACTG TTTGCGGAGA CTGGACGAGC GAAAGTCGAG TCGAAGCGGC CTATCTTTCT
GGCATCGCCG CCGCCGGTTT TGTCCTCAGG CAACACCTGA TTGCGAAGCC GGCAGCTCAG
TTGCTCTTTT GA
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| Protein sequence | MLHQELTSML SGLPEHLQER TRILSSPLSL STAANDPDQA TTHGDFVLYW MHHSLRGHEN
PALDVAIHLA HWLEKPLLVY QGLSEDHPYA NDRRHTFILQ GARDVHAELA EQKISSVLHV
ARAEDRGPHL KTLAAHAAVL VTDDVPTAPT IHWRNRLAAS IKTPIVCVNG ACIVPPQLVK
RAFDRAFAYR EATAWLYKTR NTRPWPVLRY AGKPFPLDQR PFQSVDLQQT SIADLLAISQ
IDHSVGPVQH TVGGSQAGYT RWENFKKQGL RRYADQRNDA LKDGVSRMSA YLHYGMVSPF
TLVRDCFEVG GASAEKYLDE LLIWRELAWC FCHYRTDHEA LSALPTWARQ ALKAGEADTR
PALYDEETLA RAQTHDPLWN AAQMSLLRQG ELHNNVRMTW GKAIPLWTRT TEEALRLLFD
LNHRYALDGC DPASYGGLLW CLGQFDRPFT PEEPILRSIR GRSTAEHARR LNPEKYLAKT
SRRLTAEPVK VAVIGAGITG LMAARTLSDH GFEVEVFEKS RGLGGRMATR RLPEGGQFDH
GCQYITAKSP QFERSLRSWE SQGLITPWQG LLAAQRTDGS WKELAANGPR YVGLPGMTSM
ARHLSQGLKV HQEVQIQKVE RIANQWQLQS TQGTVAGPFD QLILAIPAGQ AARLVGEHPL
AETLARIPMD PCWTVMATLS DRLNLPFDGY LSHAALAPAV GWAARDTSKP KRPTDAERWV
LQATPAWTRS HLDLSADQVA TELWHHWCEQ ISLQSHSLQV HRTPELVAHR WMFSTLDPTK
VPAEIYQKLS IERALHDPEH GLTVCGDWTS ESRVEAAYLS GIAAAGFVLR QHLIAKPAAQ
LLF
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