| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0270 |
|---|
| Symbol | |
|---|
| ID | 9136925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 342110 |
|---|
| End bp | 343789 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| Protein accession | YP_003628320 |
|---|
| Protein GI | 296120542 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.256244 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGCCG ACCCGCAATT CCTGATGAGC TGTGCTCTGT TCCTGCCTGT CCTGTGGGGT
CTGGGTCTGT TTGGTTTTCC ATCCAGAGCT GTGAGTGCGA TTCGCTGGTA TGCACTGGCC
GGGGCCTGCT GCGAACTGGC AATCACTGTG CAACTGGCTG GAATTGCTCT GGGTTGGATC
GACGCTTCAC CCGCAGTGAA TGCATCCACA ACGAGTTTAA GAAACGACAT TCTGCTGGGC
ATGAGCCTGC CGTGGATTCC CACCTGGAAT GTGAATTACT CGCTGGGAGT CGATGGCTTC
AGCCTGCCAC TCATCCTCTT GACCTCGCTG ATTTTTGTGC TTTCGATTGT GGCATCATGG
AGTATTAAAA CTCACATTCG AGGATTTCTG TTTCTGCTGT TGCTGCTGGA AACAGGGGTC
ATGGGTGTCT TCCTGGCCCT GGATTTCTTT CTGTTTTTTG TCATGTGGGA AGTGATGCTG
CTCCCGATGT ACTTTCTCAT CGGTCTGTGG GGTGGCCCAC GCCGGGAGTA TGCCGCGATT
AAATTCTTCC TGTACACGCT GGCGGGCGGT GTTTGTCTGC TGATGGCCAT GTTGATGGTC
TATTCTGCTT CGGGAGGAAG TTTTGATCTG CTTGAGCTGG CCCGCATGGC TCAGGGGCAG
GCACCAAAGC CAGGAATGGA TCTGGATCAG GGAATTGCAT TGACGGCAGC CATGGGTGAT
ACCAGTCTGC AATGGAGAGT CTTCGTGCTC CTCCTGATTG CCTTTCTGAT CAAGCTGCCG
GCTGTTCCCC TGCATACCTG GCTACCTGAT GCTCACGTCG AAGCTCCGAC TCCTGTGAGT
ATGATCCTCG CAGGGATTCT CTTGAAACTG GGTGGGTATG GCTTCTTGCG AATTGCGATT
CCGATCTGCC CGCTGGGGTT TGCCGAATGG GCGTGGTTCA TGGTGGCGCT CGGCGTGTTC
TGTGTACTGT ATGGCGCACT GGCAGCGCTG GCTCAGAGTG ATTTCAAACG ATTGGTGGCT
TATAGCTCAG TCAGCCACAT GGGCTATGTG CTGATGGGTC TGGGAGCTTT CCGTTTTCAG
GAATTGACGG GTGTTGTCCT CAATCCCGAC TTTTCCACCA TGGGACTTTC CGCGGCTACC
TTCCAGATGG TGGCTCACGG GATTGTCTCT GCCGGGATGT TCTTTGTTGT GGGTGTGCTT
TACGACCGTG TCAAACATCG CGATCTACGT CAGTTTGGCG GGATTGCCAG CCTGCAACCT
CACTTCTCAG CGATTGCTGC GGGGATTTTC TTCGCTGGTC TGGGTCTGCC GGGTCTGTGC
GGGTTTATCG GCGAAGCGTT CTCGATCTTT TCGGTCTGGC ATGTGGATCG ATTCTTCTCA
GTTGGCGGTG CCCTGGGGAT GATTCTGACT GCAGGTTACA TCCTCTGGGC GTTGCAGCGG
GTTTATCTCG GGCCAACGTA CACCGGCCCC AATCGCGAGT ACCTGACAGA GATCAATTTT
CGAGAATATA CTGTCGGCTA TATTCTGCTG GCCTTTGCGA TTGGCCTGGG TGTCTATCCT
GCGATGGCCC TCAACGTGAT TGAACCCGCA TCCCGGCAAC TGGTTCAACA GATCAGTGGT
AGCCAGGAAC GACAACTTTC TTTGAATCGA GCCAGCATTG AATCGCCATT GGACAAATAA
|
|---|
| Protein sequence | MFADPQFLMS CALFLPVLWG LGLFGFPSRA VSAIRWYALA GACCELAITV QLAGIALGWI
DASPAVNAST TSLRNDILLG MSLPWIPTWN VNYSLGVDGF SLPLILLTSL IFVLSIVASW
SIKTHIRGFL FLLLLLETGV MGVFLALDFF LFFVMWEVML LPMYFLIGLW GGPRREYAAI
KFFLYTLAGG VCLLMAMLMV YSASGGSFDL LELARMAQGQ APKPGMDLDQ GIALTAAMGD
TSLQWRVFVL LLIAFLIKLP AVPLHTWLPD AHVEAPTPVS MILAGILLKL GGYGFLRIAI
PICPLGFAEW AWFMVALGVF CVLYGALAAL AQSDFKRLVA YSSVSHMGYV LMGLGAFRFQ
ELTGVVLNPD FSTMGLSAAT FQMVAHGIVS AGMFFVVGVL YDRVKHRDLR QFGGIASLQP
HFSAIAAGIF FAGLGLPGLC GFIGEAFSIF SVWHVDRFFS VGGALGMILT AGYILWALQR
VYLGPTYTGP NREYLTEINF REYTVGYILL AFAIGLGVYP AMALNVIEPA SRQLVQQISG
SQERQLSLNR ASIESPLDK
|
|---|
| |