| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0215 |
|---|
| Symbol | |
|---|
| ID | 9136870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 278831 |
|---|
| End bp | 279658 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_003628266 |
|---|
| Protein GI | 296120488 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.716105 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCT CATTGGATCT TCCGCAATCT CGCACGATTT TCTGGCCGGC TGTCTTCACA
CTGGCACAGC GCGAAGTCAT TCGTTTCTTG AGGCAGCGTT CGCGGCTGAT TGGTGCACTG
GCCCAGCCCA TCCTGTTCTG GATTCTCTTT GGGGCAGGTC TGCGAGGTTC GTTTCAGTCG
AACGACGGCG CTTCATTTCA GGCCTATTTC CTGCCGGGTG TGGCGGTCAT GATTGTGCTG
TTCACAGCCA TTTTCTCGAC CATCTCGATC ATCGAAGATC GGCGTGAAGG GTTTCTGCAG
GGAGTTCTGG CAGCCCCGGT TTCTCGTCTG GCCATCGTGA TTGGTAAATT GCTGGGTGGT
TCGATACTGG CTGTCTCTCA GGCTCTGTTG TTTCTCTTGA TTGGGCCTTT ACTCTCTTTC
ATCGGGCTGA CGGAATCCGT CCCGCTGGGC CTGACCATCT CGAACATTCT GCCAGTGATT
GGCTTTCTCA CGCTCCTTGC CTTCGCACTG ACCGGGCTGG GTTACATGAT TGCCTGGCAG
ATGACATCCA CGCATGGATT TCACGCCATT ATGAGTGTCT TTCTCATGCC CATGTGGTTG
TTAAGTGGTG CTTTTTTTCC CGCTCAGGAA GGTTGGCTCA AATGGGTTCT CGCTGTGAAC
CCACTCACCT ATGGAGTCGC TGGTTTAAGG CTATTGTTGC GCCCCGAGTC GGCCATCAAT
TTACCATCCT GGAATACCTG CCTGCTCGTG ACTGTTTTAT TTGCTGTTTT CTGTGTGACT
GTGGCCTGCT GGCAAACCAG TCAGAGATCG ATCAGAAATG TTCGCTGA
|
|---|
| Protein sequence | MATSLDLPQS RTIFWPAVFT LAQREVIRFL RQRSRLIGAL AQPILFWILF GAGLRGSFQS
NDGASFQAYF LPGVAVMIVL FTAIFSTISI IEDRREGFLQ GVLAAPVSRL AIVIGKLLGG
SILAVSQALL FLLIGPLLSF IGLTESVPLG LTISNILPVI GFLTLLAFAL TGLGYMIAWQ
MTSTHGFHAI MSVFLMPMWL LSGAFFPAQE GWLKWVLAVN PLTYGVAGLR LLLRPESAIN
LPSWNTCLLV TVLFAVFCVT VACWQTSQRS IRNVR
|
|---|
| |