| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0203 |
|---|
| Symbol | |
|---|
| ID | 9136858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | - |
|---|
| Start bp | 264575 |
|---|
| End bp | 265204 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_003628254 |
|---|
| Protein GI | 296120476 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTTCC ATTCGATCGC CCGGAACATG ATTTTCATCG GCCTGTGGCT GGCCTGGCCG
GCTCTGCTGG CTGCCGGTGA ATTCAACACT GTCCTCAGCA TTGGCGACAA GGCTCCCGCC
TGGAGCAAAC TGCCCGGTGC CGATGGTAAG GAGCATTCGC TCGCGGATTT GGCGGAGTGT
AAAGCCGTGG TCCTCGTCTT TACCTGCCTC TCCTGTCCGA CGGCTGTGGA CTACGAAGAA
CGTATTGAAA AGCTGCGAAA AGATTACGCA CCACGGGGAG TCGAGGTGGT CGCTGTCTGT
GTGAATCAGG TTCCGCAGGA TCGTCTGGAA GCAATTACTC AGCGCGTTCA AAAGAAAGGT
TACTCGTTCC CTTACCTGTA TGATGAGACG CAGAAAATCG CCAAGGATTA CGGGGCGATT
TTTACTCCCG AGTTTTATGT GCTCGATGGA GAACGGAAGA TTGCTTACAT GGGTGCCATG
GACGATAAGA CCGAAGCCGA AAGTGTCGAA GTCAAGTATG TCTCGGCAGC TCTGGATGCC
ATCCTGTCAG GTCAACCCGT CCCCAAAGCC GAAGTGATCG CCCGAGGTTG CCGCATTCGC
TACGCCCGCG AACGCCGCGA ATCGAAGTAA
|
|---|
| Protein sequence | MLFHSIARNM IFIGLWLAWP ALLAAGEFNT VLSIGDKAPA WSKLPGADGK EHSLADLAEC
KAVVLVFTCL SCPTAVDYEE RIEKLRKDYA PRGVEVVAVC VNQVPQDRLE AITQRVQKKG
YSFPYLYDET QKIAKDYGAI FTPEFYVLDG ERKIAYMGAM DDKTEAESVE VKYVSAALDA
ILSGQPVPKA EVIARGCRIR YARERRESK
|
|---|
| |