Gene Plim_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0194 
Symbol 
ID9136848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp252419 
End bp253309 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content55% 
IMG OID 
Productnicotinate-nucleotide pyrophosphorylase 
Protein accessionYP_003628245 
Protein GI296120467 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCACA GCTTTTTTGG ATCGATCGAA AAGGCAGCCG CCGAGCGACT GATTCTGTGG 
GCCTTTCAGG AAGATCTTGG CGAGCGAGGG GATTTGACCT GTCAGGGGAT GATCGACCCG
ACTTTGGTTG CCACAGTGAA AATCGTCTCA CGTCAGCCGG GAATTCTGGC AGGCCTGCCA
ATTGCCCAGA TGATCTATCA ACAGATGGAT GCATCGATCC AGTGGGAGGC ATTCGCTGTC
GATGGTGATG AACTGACGGC TGGCCAGGTG GTGGCTGAAG TGACAGGCCC CGTCTCGACA
TTATTGACCG GCGAGCGAAC CGTCCTGAAT TTCGTGACAC ATTTGAGCGG TATTGCTACG
CTCACACATC AGTTTGTGGA GTTGGCCCAG GGGACAAAGG CAAAAATCCT GGACACTCGC
AAGACATTGC CCGGGTATCG CAGTTTAGCG AAATATGCCG TGCGTTGTGG GGGTGGGCAC
AACCACCGCA TGGGGCTTTA TGATGGCATT CTGATTAAAG ACAACCATCT TGCGGCCTGG
AAATCGAGCG GCTCTATTGC AGAAGCCATT GAGCATGTGC GGGCTCAAAT GGGAGCAAAC
ATCGATATCG AGGTGGAAGT CGATACGTTG GAGCAAATGG TCGATGCCAT GCGGGCGAAG
CCGCAGATCA TTCTGCTGGA CAATATGACC ACTCGCGAAT TGACCGAGGC GGTAGCGTAT
CGCGACCAGC ATGCTGCCGA AATCCTGCTG GAAGCTTCGG GAGGTGTGAA CCTGACGACA
GTGGCGGCCA TTGCTGCCAC AGGCGTGGAT CGCATCAGCA TTGGTGCATT GACCCATAGT
GCCCCACAGC TGGATCTGGC TCTTGACTGG GGTGCGGCAC TGAAGAAATA G
 
Protein sequence
MAHSFFGSIE KAAAERLILW AFQEDLGERG DLTCQGMIDP TLVATVKIVS RQPGILAGLP 
IAQMIYQQMD ASIQWEAFAV DGDELTAGQV VAEVTGPVST LLTGERTVLN FVTHLSGIAT
LTHQFVELAQ GTKAKILDTR KTLPGYRSLA KYAVRCGGGH NHRMGLYDGI LIKDNHLAAW
KSSGSIAEAI EHVRAQMGAN IDIEVEVDTL EQMVDAMRAK PQIILLDNMT TRELTEAVAY
RDQHAAEILL EASGGVNLTT VAAIAATGVD RISIGALTHS APQLDLALDW GAALKK