| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0185 |
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| Symbol | |
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| ID | 9136839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 239833 |
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| End bp | 240675 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_003628236 |
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| Protein GI | 296120458 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00343666 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTCA CTAAAATGCA TGGAATCGGC AATGATTACG TCTATGTGAA TCTGTTCGCA
GAGAAACTTC CGCTCGCTGC GCCCGATTTG GCCCGAATCG TTTCGAACCG CTACAAGGGA
ATTGGTGGCG ACGGGCTGAT CCTCATTGGC CCATCCGAAC GCGGCGATGC CCGCATGCAG
ATGTTCAATG CCGACGGCAG CGAATCGGAA ATGTGCGGCA ACGGCGTTCG CTGTGTGGCC
AAGTATGTCT ATGATCACGG CATTGCCAAA AAGCCTGAAC TCAGAATTGA GACTGGCCGA
GGTGTGTTGA CTCTCCAGAT GTTTGCGGGC TCTTCTGGTA AGGCGGAACG TGTCCGCGTC
AACATGGGGA CACCGATTCT CAAAAGTGCT GATATCCCCA CAGCATTGCC CGGGGATCCG
CCTGTGAATC AACCGCTGGT TGTGGGCGAC AAAACCATCT CCGTCACCTG TGTTTCGATG
GGGAATCCGC ATTGCGTGAC ATTTGTGGAT GAGCTGACGG ATGCCTGGGT GCTGGGCCTT
GGGCCGCAAG TCGAAGTGCA TGCCGCTTTT CCACGCCGGG TGAATGCCGA GTTCGCACAG
GTCCTTTCGC GGACCGAAAT TCAATTGCGT GTCTGGGAAC GTGGCAGTGG TGAAACTCAG
GCGTGTGGAA CGGGAGCTTG TGCCACACTC GTGGCAGGTG TGCTCTCTGG TCGGACTGAC
CATCAGGCAC TGATTCATCT TCCTGGTGGT GATCTCGAGA TTGAATGGCC CGATGAAAAG
GAAGTCTTTA TGACGGGCCC CGCGACCGAA GTTTTTACTG GTGAGTGGTT CCCTGAGGTT
TGA
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| Protein sequence | MRFTKMHGIG NDYVYVNLFA EKLPLAAPDL ARIVSNRYKG IGGDGLILIG PSERGDARMQ
MFNADGSESE MCGNGVRCVA KYVYDHGIAK KPELRIETGR GVLTLQMFAG SSGKAERVRV
NMGTPILKSA DIPTALPGDP PVNQPLVVGD KTISVTCVSM GNPHCVTFVD ELTDAWVLGL
GPQVEVHAAF PRRVNAEFAQ VLSRTEIQLR VWERGSGETQ ACGTGACATL VAGVLSGRTD
HQALIHLPGG DLEIEWPDEK EVFMTGPATE VFTGEWFPEV
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