| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0170 |
|---|
| Symbol | |
|---|
| ID | 9136824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 225203 |
|---|
| End bp | 226222 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | ATP synthase F0, A subunit |
|---|
| Protein accession | YP_003628221 |
|---|
| Protein GI | 296120443 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.222204 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCGG ACCACAACGA TTACTTTCAC CATATCAGTG ATGCACTCGA ATTCGAGATG
CCCGAGTTTG TGTACTCGTT CATCGACCGA GGGTACTTTC ACCTGCCCAA GATCTTCAGT
TTTCAGATCA CCAAATTCAT GGTGATGCAG GTCCTGGCGG CAGTGCTGGT TTACCTGATT
TTCCGCGGGC TTGCGAAACA GGTTGCCAAT GGCGAACCTG CCCGAGGGAG ATGGTGGAAT
TTCTGGGAAA CTCTTGCGGT TTTCGTACGG GATGAAGTCG TCCGATCTTC GATCAGCGAG
CCTCACGCAC ACCACGACGA TCATGGTCAC GGTCAGACTC ACGCCCAGGC GAACTATCAT
GCTCAGGCTT ATGTCGATGC AGGGCAGACG CATGTTCACG GCCATGTGCA ACCTCAGTTA
GCTGCTGTTG GCGGTCACGT GATGGCGACG AGCATTGATG AATCCAAGGA TCTGGCTTCG
ACCGGAACTC ATTACGCAGA TCGCTTTCTG CCGTTCATCT GGTCGCTGTT TTTCTACATT
CTGTTCTGTA ACCTCCTGGG AGCCTTCCCT CTCTTCGGCA CGGCCACAGC CAGTACTAGT
GTCACTGGCG TGCTGGCGTT AAGCGTGCTG GTGGTCACGA TTGGCGCTGG GATTAAACAA
TCGGGGGCTG TTGGTTTCTG GAAATCGCTG GTTCCCTCAA TGGATATTCC CGGCATCATT
GGGCCACCGC TGAAAGCACT GATCTTCGTC ATTGAGCTTG CTGGGCTGTT TATCAAGCAC
ACCGTGTTGG CGATTCGATT GTTTGCCAAC ATGCTCGCGG GCCATGTGGT GATCGCTGTC
TTTCTGAGCT TTATTGCAGC GACGGCGAAC TCCGGGATTT TATGGTATGC AGTCACTCCC
GCCAGTATTT TTGGGCAGTT GGCGATTGGT GCTCTGGAAT TGTTTGTAGC CTTTTTGCAG
GCTTACGTGT TCTCTTTGCT GGCGTCGTTA TTCATTGGGG CGGCCGTCAA TCCTCACTAA
|
|---|
| Protein sequence | MSADHNDYFH HISDALEFEM PEFVYSFIDR GYFHLPKIFS FQITKFMVMQ VLAAVLVYLI
FRGLAKQVAN GEPARGRWWN FWETLAVFVR DEVVRSSISE PHAHHDDHGH GQTHAQANYH
AQAYVDAGQT HVHGHVQPQL AAVGGHVMAT SIDESKDLAS TGTHYADRFL PFIWSLFFYI
LFCNLLGAFP LFGTATASTS VTGVLALSVL VVTIGAGIKQ SGAVGFWKSL VPSMDIPGII
GPPLKALIFV IELAGLFIKH TVLAIRLFAN MLAGHVVIAV FLSFIAATAN SGILWYAVTP
ASIFGQLAIG ALELFVAFLQ AYVFSLLASL FIGAAVNPH
|
|---|
| |