| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0082 |
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| Symbol | |
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| ID | 9136735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 111846 |
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| End bp | 113648 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003628134 |
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| Protein GI | 296120356 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.214348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGCT TACTGTCTCT CCTTCAGTAC TCGCTGCTTT GGGGCATCCT GGTCTCTGGC
AGCATGTGCC TGTTTCAGGG CGAAGCTCTG GCACAAGGTG GCGCTGTCAC CACAGCCGCT
CCCTCGACTT ATCCACCTGT CCCAGGAGGC CTTTTCTACC GCGGTAATAA CCCCACCCAG
CCGGGTTCTG CGGGATATTA CTTCAGCCTC CCGATGCTCA TCTTCTCACT GTCGCTGGTC
ACGCTGATGG TCTGGACCTT GGGCTGGATT GCTGATGATG CGCGCAGTCT GAAGGTCCGC
CCCGAGTTCT GGAATACGCT GGGTTTACTC GTCGCCGCCG CCGCTGTGCT GATTTTGTAT
CTCGGGCCGA CACCGCTGGT GGCCGTCCTC GGATTTCTGA TCTGCTATGC CGGTTTACTG
GGAGGCTATG CTCCCGAACG TAACCGCAAG GTTCCTGAGA ACTCGAAGAT CCTTACGCCC
TATCATCTCC AGACCATCGC CATACGCGGC CTGGCACGCC TCGGGATTGA AGTGGGTGGC
AAGAAAGCGG TCCATGCCGC CATGGGGCCA CCCATCACGT TTATCGGGAA GTCGAATAAA
GGGGCTGGCG AGGTCGATCG ATCGAGGCAA GTCGAAAGCA GCCGAGGCTA CACTTCCGCT
CGGGAACTTG TCTACGACGC CATTCTTCGC CGGGCGACCG ATATTCACCT CGAGCCCAAA
GACGACGAAT TCGCCGTCCG GCTGCGCGTC GACGGAGTGA TGTTCCCCGC CGAACCATTC
GATCGACCCA CCGGCGAATC GGTCGTGAAT ATTTTCAAAG TGCTCGGAGC GATGGATATC
ACCGAACGCC GCAAGCCACA GGACGGCAGC TTCCGTGCCG AGACCGAAGG TCGCGAAATT
GACTTTCGCG TCGCCACGCA GGGTACACAG TTCGGCGAGA AGATGTCGCT GCGTATTCTC
GATGGTGGTT CAACAGTCCG CCGCCTGGCA GATCTAGGCA TGCGCAAGCA GTTGATCGAG
CAGATCGTAG GAATTGTCCA ACAACCCCAC GGATTGTTCC TCTCCTGCGG GCCAACTGGT
GCCGGTAAAT CGACCACACT TTATGCGGCT CTCCAGGAAA TCAACCGCTA CGAAAACAAC
ATCATCACTG TCGAAGATCC CGTCGAATAC AAGATGGATG GTGTGACCCA GATCGAAATC
AATCAAAAAG CGGGGCAGAC CTTTGCGGCC TCTTTGCGCA GTATTCTTCG CCAGGATCCC
GATGTGGTGA TGCTGGGCGA AATTCGTGAT GGAGAAACCG CCAAGATCGC CTGTCAGGCA
GCCAACACCG GACACATGGT CTTCTCGACA GTTCACGCCA ACGACACGAT TACAGCCCTC
TCGCGTCTGA TCGATCTGGG TGTCGAACCG TTCCTCCTCT CCGATTCGCT CTCAGCCATT
CTCGGCCAGC GGCTCTGTCG CAAATTGTGC GACGACTGCA AAGAGTCGTA CAAGCCCTCC
GCCGATCAAC TGGAAAAGAT CGGTCTCCCC GCCGAGAAAG CCGGTGTGTT CTACCGCCCG
CCCAAGGATG GTACCGATGC CTGCCCGACT TGCAGTGGCA TGGGATACAT GGGACGAATC
GGCGTTTTTG AATTGCTGGT GATCAACGAT CGCATCCGAG ACCTGCTGCG GGAATCGCCG
AACATGACAT CTGTCCGGGC CGAAGCCCGT AAACAGGGCA TGCTTTACAT GCGAGAAGAA
GGCCTGCGAC TGGTTCTCAA AGGAACAACA AGCCTCGAAG AACTTCTCCG CGTGGTGAAG
TAA
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| Protein sequence | MQRLLSLLQY SLLWGILVSG SMCLFQGEAL AQGGAVTTAA PSTYPPVPGG LFYRGNNPTQ
PGSAGYYFSL PMLIFSLSLV TLMVWTLGWI ADDARSLKVR PEFWNTLGLL VAAAAVLILY
LGPTPLVAVL GFLICYAGLL GGYAPERNRK VPENSKILTP YHLQTIAIRG LARLGIEVGG
KKAVHAAMGP PITFIGKSNK GAGEVDRSRQ VESSRGYTSA RELVYDAILR RATDIHLEPK
DDEFAVRLRV DGVMFPAEPF DRPTGESVVN IFKVLGAMDI TERRKPQDGS FRAETEGREI
DFRVATQGTQ FGEKMSLRIL DGGSTVRRLA DLGMRKQLIE QIVGIVQQPH GLFLSCGPTG
AGKSTTLYAA LQEINRYENN IITVEDPVEY KMDGVTQIEI NQKAGQTFAA SLRSILRQDP
DVVMLGEIRD GETAKIACQA ANTGHMVFST VHANDTITAL SRLIDLGVEP FLLSDSLSAI
LGQRLCRKLC DDCKESYKPS ADQLEKIGLP AEKAGVFYRP PKDGTDACPT CSGMGYMGRI
GVFELLVIND RIRDLLRESP NMTSVRAEAR KQGMLYMREE GLRLVLKGTT SLEELLRVVK
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