Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0080 |
Symbol | |
ID | 9136733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 109938 |
End bp | 110912 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | PSP1 domain protein |
Protein accession | YP_003628132 |
Protein GI | 296120354 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.918757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATGT CAGCTCCCCC CAGCCAGGCA TGGGTTGTTC GCTATGGCGT GACGCGTCTG CTGGGAGAGT TCGTCATTCG CGGGCCGCAC ATTCCTGTCT CTCGCGGCAC CCAGGTGATT GTACGCTCAG ATCGCGGGAC GGAATGGGGC GAAGTGCTCT GTGCTGCGTC CGAGAGTACT CGAGAGTGGC TGGGAATCGA TAAGGAAACT GGTCGAATCT TAAGACTGCC GACCCTCGAT GATGAGCGGC ATAAAGACCG TGTGGCTCAA CTGGAAGTCG AAGAATTCAA CAGTTGCAAG CAATTGATCG GTGAAATGTC TCTGCAGATG CAGCTCGTCG ATACCGAGCA CGTCTTTGGC GGTGAACGAA TCGTTTTTTA CTATGTCTCG GAGCAGCGGA TTGACTTCCG TGAACTGGTC AAAGTCCTGG CCAAAAGGCA TCAATCGCGC ATTGAAATGC GGCAGATTGG AATTCGGGAT GAAGCTCGCC TGCTCGCCGA TTACGGCGAT TGCGGCAAGC CCGTCTGTTG TAATACGCAC CTCAAGGAAA TGCCCCCAGT TTCGATGAAG ATGGCCAAGC TGCAGAAGGC CACTCTCGAT CCCTCGAAAA TCTCCGGGCG CTGCGGTCGG CTCAAATGCT GCCTGCGATA CGAATACGAT ACTTACGAAG AACATCGCAA AGAACTCCCT CCCATTGGTG CGACAGTCGT GACCAAACTG GGCCAGGGTA GAGTCGTCGC TCAGGAACTG CTGGCTAAGA AGCTGATGGT GGCTTACGAA GGCCAGCGGA CAGTGCTGAC CGATCAGAAA GAGATCATCA CCGTGGTCGG GAAAAAGGGG CTGCCGGCGG CTGTCGAGCG GGAAATCGAA GAGGAGGAGG CGGAGGAATT CATGCAGTCC GAATCTTCCC GACCACCTCG CCCGCAGCGC CCTCCTCGCA ATCCCTCAGA GAATCGAAAC CAGCCTGATC GCTGA
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Protein sequence | MDMSAPPSQA WVVRYGVTRL LGEFVIRGPH IPVSRGTQVI VRSDRGTEWG EVLCAASEST REWLGIDKET GRILRLPTLD DERHKDRVAQ LEVEEFNSCK QLIGEMSLQM QLVDTEHVFG GERIVFYYVS EQRIDFRELV KVLAKRHQSR IEMRQIGIRD EARLLADYGD CGKPVCCNTH LKEMPPVSMK MAKLQKATLD PSKISGRCGR LKCCLRYEYD TYEEHRKELP PIGATVVTKL GQGRVVAQEL LAKKLMVAYE GQRTVLTDQK EIITVVGKKG LPAAVEREIE EEEAEEFMQS ESSRPPRPQR PPRNPSENRN QPDR
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