Gene Plim_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0080 
Symbol 
ID9136733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp109938 
End bp110912 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content56% 
IMG OID 
ProductPSP1 domain protein 
Protein accessionYP_003628132 
Protein GI296120354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.918757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATGT CAGCTCCCCC CAGCCAGGCA TGGGTTGTTC GCTATGGCGT GACGCGTCTG 
CTGGGAGAGT TCGTCATTCG CGGGCCGCAC ATTCCTGTCT CTCGCGGCAC CCAGGTGATT
GTACGCTCAG ATCGCGGGAC GGAATGGGGC GAAGTGCTCT GTGCTGCGTC CGAGAGTACT
CGAGAGTGGC TGGGAATCGA TAAGGAAACT GGTCGAATCT TAAGACTGCC GACCCTCGAT
GATGAGCGGC ATAAAGACCG TGTGGCTCAA CTGGAAGTCG AAGAATTCAA CAGTTGCAAG
CAATTGATCG GTGAAATGTC TCTGCAGATG CAGCTCGTCG ATACCGAGCA CGTCTTTGGC
GGTGAACGAA TCGTTTTTTA CTATGTCTCG GAGCAGCGGA TTGACTTCCG TGAACTGGTC
AAAGTCCTGG CCAAAAGGCA TCAATCGCGC ATTGAAATGC GGCAGATTGG AATTCGGGAT
GAAGCTCGCC TGCTCGCCGA TTACGGCGAT TGCGGCAAGC CCGTCTGTTG TAATACGCAC
CTCAAGGAAA TGCCCCCAGT TTCGATGAAG ATGGCCAAGC TGCAGAAGGC CACTCTCGAT
CCCTCGAAAA TCTCCGGGCG CTGCGGTCGG CTCAAATGCT GCCTGCGATA CGAATACGAT
ACTTACGAAG AACATCGCAA AGAACTCCCT CCCATTGGTG CGACAGTCGT GACCAAACTG
GGCCAGGGTA GAGTCGTCGC TCAGGAACTG CTGGCTAAGA AGCTGATGGT GGCTTACGAA
GGCCAGCGGA CAGTGCTGAC CGATCAGAAA GAGATCATCA CCGTGGTCGG GAAAAAGGGG
CTGCCGGCGG CTGTCGAGCG GGAAATCGAA GAGGAGGAGG CGGAGGAATT CATGCAGTCC
GAATCTTCCC GACCACCTCG CCCGCAGCGC CCTCCTCGCA ATCCCTCAGA GAATCGAAAC
CAGCCTGATC GCTGA
 
Protein sequence
MDMSAPPSQA WVVRYGVTRL LGEFVIRGPH IPVSRGTQVI VRSDRGTEWG EVLCAASEST 
REWLGIDKET GRILRLPTLD DERHKDRVAQ LEVEEFNSCK QLIGEMSLQM QLVDTEHVFG
GERIVFYYVS EQRIDFRELV KVLAKRHQSR IEMRQIGIRD EARLLADYGD CGKPVCCNTH
LKEMPPVSMK MAKLQKATLD PSKISGRCGR LKCCLRYEYD TYEEHRKELP PIGATVVTKL
GQGRVVAQEL LAKKLMVAYE GQRTVLTDQK EIITVVGKKG LPAAVEREIE EEEAEEFMQS
ESSRPPRPQR PPRNPSENRN QPDR