Gene Plim_0078 details

Gene Information

• Locus tag: Plim_0078
• ID: 9136731
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Planctomyces limnophilus DSM 3776
• Kingdom: Bacteria
• Replicon accession: NC_014148
• Strand: +
• Start bp: 105982
• End bp: 108105
• Gene Length: 2124 bp
• Protein Length: 707 aa
• Translation table: 11
• GC content: 57%
• Product: hypothetical protein
• Protein accession: YP_003628130
• Protein GI: 296120352

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGGTA TCAAAGGTTT GAATTTCAAA TCGCTGCTGG TCGATCATGG CGAGAAAATC 
GTACTGGCCG GTATTGGCCT GCTGGTGCTG GGTGTGTGGG GAACCACCTC CTGGAGCCGG 
ACAGAGAAAT CGCCGGATGA GATCATCAAG AAGGCCACCA ATTCGAAAAC GAATATCGAT 
GCGGGTGTGT GGCCTGTGGA GAAAGCCAAC GAGTTTGCGA TTGTGGCTTA CCAGGATCGT 
GCCTCTCAGC TGTTGAAGCC GATGGAGTCG GTCGCCGCTT ACGAGTTTTC GACACCTCTC 
TACCATCCGC TTTATCGCAA GCAGGAGCAG ATTAAGGAAC CAGAATGGTT GCCTGTGGCC 
GACCTGATTG CCGATGCCGG GACAGCGATC ATCGCGATTA ACAAAGGCCT CGATGTCACT 
CTCGCGGAAA CAGAAACCGG GGATTTGACC AAGGCCAGTG AAGAAGAAGT CAACACGGAA 
TTCGCGATTC GTTCTGGCGT CGGCGGAACA GCAGCCGGCG GCCCGGGTGC ATCGGGCGCG 
GAAACTCCTG TCGGCAGCTA CAGTCCGCCA CCCGTTTCCG AATCGACCTT TGGCAGTTCG 
TCTCCATATG GTTTGGATGG CAGCGTCGGC GGCACAGTTT CGAGCGTCGA AGCTCGCGGC 
GTGCGCTATG TCGCTGTGCG CGGCATTGTT CCTTTGCAGC AGCAGGTGGC CAAGCTTCAG 
AAAGCACTGA ACCTGCAGAG CCTCACGGAA GCCGAGCAGT ATCTTGAACT CCTCGACTTC 
AAGCTGGAAC GTCAGGAGGC CGTCGCTGGC GACAACCCGT GGGTCGGGAA GTGGGAAGCG 
GTCGATATGG TGGCCGACTC ACAGATTCTG GCGGAATCGC CCAACTTCGA TATTGATCCC 
TTCGATGCCC GCATCTCAGA TGCGACGATC ACCGCCCCAC TCCCGTTGAG GCTGATGGGG 
TACTGGGGCG AACATGCGAC ACATCCGAAA GTCCGAAATT TCACTTTAAG CCCGGAAGAG 
CGTGCCAAGC AGGAGCGATT CCTCGATAAG GTTGTCGAAA CTGCGACAAA AGAGCGGGCC 
CTGCTGGAAC AATCCCAGAA GCCACAAAGG CGCGGGTTTG CCGTCGTGCA GCGGGATTTG 
CGAGCCTTGC AAGGGGCGAT TATGTCGTCG AGCAGTTCTG ACCAGATTCT GGGAACAATG 
TCGACGATGA TGGCAGTGCC TGGCAGCCCT GCGATGACAT CTCAACAGCT CAAAAAGATG 
CTCGACACGG CGGGTGGCCG GTTGCTGCTG TTCCGATATC TGGACCTGCA GGTGAAGCCG 
GGCCGCGCCT ATCGCTACCG CGTGAAGCTG CTCTTTACGA ATCCGAACTA CAATCTGCCA 
ATTGAACAGA TCGTGGATCC TTCGGTCGCT GCGGGAGCCG AGCGGGAATC ACCCTGGAGC 
ACGATTTCGA ATCCAGCAGT GGTTCCTGGG GATGTCAAAT ACTTCCTGGC TGGAAGTGAA 
CGTGATCCCG TCCGCGACGT GACCCGCTCG ATTCGTAAAG CCGTGGCCAA TATGAGTGTC 
TACCAGTGGG ATGCCAAACT CGGATCACTC CTGAATTCCA CGCTCGATCT CACCTCGGTC 
GGCCAGGTCA TCAAAGAGAC CAAGAAGGTG AAGAGGGCCG ATCTGGGGAA TGGCACGTAT 
GAAGATGCCG ACATCGTGAT CGGCACCACA GACCTGCTGC TGGACGTCGC CGCGGATGTC 
GAAGTCAACG TGACCTTACA GTCCAAGCTG CCTGTCCACA TGGCTGAACT GGGACTGACT 
CCCGTCAGTG GCAAACTCAA TTTTGGCTTG CTGCCTGAAG CTGTCGTTGT CAATGAAGCG 
GGTCAAATGG AATTTATTGA TTCCAAGACC AACCAGAAAC AGGAAGACGA GCTGAAGCGC 
AGGTATGAGG GCGAGAAAAA AGAGTATGAG AAATTCAAGC CGCCCGAAGT AGCTGACCCA 
CTTCTGGGCC CGGGTGGTGG CGAGGAGAGT AGTTATGTTC CGCCAGGTAT GGGAGATCCG 
ACGGCGCGAA AAGTGAGTTC CAAGAAGATT CGCACGAATC GCAAGGGCCA GCCGGGCATG 
GGATCGAGCC CACCCGCCCC ATGA 

 

Protein sequence

MAGIKGLNFK SLLVDHGEKI VLAGIGLLVL GVWGTTSWSR TEKSPDEIIK KATNSKTNID 
AGVWPVEKAN EFAIVAYQDR ASQLLKPMES VAAYEFSTPL YHPLYRKQEQ IKEPEWLPVA 
DLIADAGTAI IAINKGLDVT LAETETGDLT KASEEEVNTE FAIRSGVGGT AAGGPGASGA 
ETPVGSYSPP PVSESTFGSS SPYGLDGSVG GTVSSVEARG VRYVAVRGIV PLQQQVAKLQ 
KALNLQSLTE AEQYLELLDF KLERQEAVAG DNPWVGKWEA VDMVADSQIL AESPNFDIDP 
FDARISDATI TAPLPLRLMG YWGEHATHPK VRNFTLSPEE RAKQERFLDK VVETATKERA 
LLEQSQKPQR RGFAVVQRDL RALQGAIMSS SSSDQILGTM STMMAVPGSP AMTSQQLKKM 
LDTAGGRLLL FRYLDLQVKP GRAYRYRVKL LFTNPNYNLP IEQIVDPSVA AGAERESPWS 
TISNPAVVPG DVKYFLAGSE RDPVRDVTRS IRKAVANMSV YQWDAKLGSL LNSTLDLTSV 
GQVIKETKKV KRADLGNGTY EDADIVIGTT DLLLDVAADV EVNVTLQSKL PVHMAELGLT 
PVSGKLNFGL LPEAVVVNEA GQMEFIDSKT NQKQEDELKR RYEGEKKEYE KFKPPEVADP 
LLGPGGGEES SYVPPGMGDP TARKVSSKKI RTNRKGQPGM GSSPPAP