| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0076 |
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| Symbol | |
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| ID | 9136729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 101772 |
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| End bp | 104021 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_003628128 |
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| Protein GI | 296120350 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAAT TGAAATCTGC CTGGGGGATC GAGATTGGAC AGGCTGGTCT CAAGGCCATC
AAGCTGCGCT ATGCCGAGGC CTCGAATCAG GTCTTTGCTG TCGCGTTTGA TTATGTGCCG
CATCCCAAAC TGTTGAGCCA GCCCGATGCA GATCCGGATG AACTGATTTC CGAAGCTCTC
AAAACCTTTT TGAGCCGCAA TCAGATTCAG GGAGATCTGC TGGGAATTTC GCTCCCGGGA
TCAAAATCGC TGCTGAAATT CATTCAATTG CCACCTGTCG AAGAATCGAA GGTGGCCGAG
ATTGTGCGCT ATGAAGCCCG CCAGCAGATT CCTTTCCCAC TGGAAGATGT GATCTGGGAT
TTCCAGCCCA TGGGATCATC TTCCGTCGAA GGTGGATTCA TGCTGGATGC CGAAGTCGGC
CTCTTCGCCA TGAAGCGGGA CGACATTGAA CACCAGATGT ATCCGTTCAA TCAGCGGAAG
CTGGAACTGG AACTGGTGCA GATCGCACCT TTGGCCGTCT ACAACTTTCT CTGGTTCGAC
CGGCTGGGAC AGCGGAAAGA CCCTGAGCAA TCGCTGAATA CACTGGCCGA TGACCAGTAT
GTCGTTGCGC TTGATATGGG CTGCGACCAG ACGACATTGA TCGTCACTAA TGGCAAGAAG
ATCTGGACGC GTAACGTGCC GATTGGTGGC AATCATTTTA CGCGGGCATT GACGCGGGAA
ATGAAGCTCA CGTTTGCCAA GGCGGAACAT CTCAAATGCA ATGCCACAAA ATCGCCTGAT
CCCAAGGCTG TCTTTCAGGC CATGCGGCCT GTCTTCAACG ACTATGTGAA TGAGATCCAG
CGATCGATTG GCTTCTTCTC GAGTGTCAAT CGCTCGGCTC AAATCACGAA ACTGGTCGGT
CTGGGAAATG GCTTCAAACT GGCTGGTCTG GCCAAGTTTC TCCAGCAGAA CCTCAACTAC
GAAGTCGAGA AGATCGACAC GTTCCCGAGT TCCGTGGGCG ACAGTGTCCT GACAGCGCCA
CTGTTCCATG ACAACATTCT GACGTTCACT GGCCCCTATG GACTGGCCCT CCAGCTTCTC
GGGCAGACGC AGATTCATAC TTCTCTGTTG CCACCCGAAA TTGTGGTGGC CAGGAAGATT
CGCCGCAAAA AGCCGTGGGC AGTCGCTACC GCCGCCGTGC TGCTCTTCGG ACTGGCCACA
TCGGTGGCGG GTTATGGCAG CGTCGCCCAA TCGGTGAGTA AGAGCCGCTT TGGTAATGCT
GAAACTCAGG CCGATGAAGT TGCCAAATAC GCCTCCAAAC TCGACAGCGA TTACAAGGCT
CAGGAAGGGC GTAATGCGGC CGCCAAAGAG CGCGGGGAGA AACTGGTCAA AGCCCTCGAT
TCCCGTGCCA ACTGGCTGGA ACTCTACAAG GCGATTGATG AGAGCCTGCC CCGCGATGAA
AGTGCCGAAC AACTCGATGA GACTCGCATC GAACTGATGA ATCGCATTTC ACTGAAGTCG
GTGACATCCA AGAAATACGA TGACCTGGCA ACCTGGTACA ACGATAACGC TCAATTAGCG
AAGGTCTCAC CTCAATACTT TTCAGCCTTC GATAAAGCTG AGGCACGCAA GACCGGGCCC
ACCGGCCCAG GCTATGTCTT CACTCTGCAC GGGGTGCATT TCCACCATGC TCCGGAAGAT
CCTGTCAAAG GCCAGGGAAC AGGGTATGTC GTGAATACTC TGCTCAAAAA TCTGCAGAGC
TTTAAGGTGA CTCGCAAAGA CTCGGTCACT GGTCAGGTGA TTGAGACACC TGTTGGTCAA
CTTGGGATCA GTTACGCGAC CGTCAAAGCG GATCCATTTG TGCTCATCGA TTACTACCCG
ATGGGTCGTC CCGATATGGC CAGTGCGAGC AGTGCGGCTC GCGGCCTGAG GCCTGGCTTC
CAGCCTGGTT TCAATCCCGG CGGCTCAGGT GCTGAGTCGA GCTATTCCCC GCCGACACCT
GGTGGAATTT CCAGTCCGGG AATTCCCAGT CCTGGCATTC CCGGGACAGG AACAGGCCGT
GTGATCGATA CCCAGTTGCC ACCTGAGCAG GTCAATACGC CTCGTAAGAT TCATATGACG
AACTTTGTCG TGCAGTTTGT CTGGAAGCCG ACTCCGGAAA AAGATCGACC TAAAGAAGAT
CCAGCCCTTC CGCCAGTCGA TCCCGCTGCA GCACCGCAGG ATGGCCAGGC AGCACCAGTT
GCCACACCAC AGACACCACC CGCAGTTTAA
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| Protein sequence | MAELKSAWGI EIGQAGLKAI KLRYAEASNQ VFAVAFDYVP HPKLLSQPDA DPDELISEAL
KTFLSRNQIQ GDLLGISLPG SKSLLKFIQL PPVEESKVAE IVRYEARQQI PFPLEDVIWD
FQPMGSSSVE GGFMLDAEVG LFAMKRDDIE HQMYPFNQRK LELELVQIAP LAVYNFLWFD
RLGQRKDPEQ SLNTLADDQY VVALDMGCDQ TTLIVTNGKK IWTRNVPIGG NHFTRALTRE
MKLTFAKAEH LKCNATKSPD PKAVFQAMRP VFNDYVNEIQ RSIGFFSSVN RSAQITKLVG
LGNGFKLAGL AKFLQQNLNY EVEKIDTFPS SVGDSVLTAP LFHDNILTFT GPYGLALQLL
GQTQIHTSLL PPEIVVARKI RRKKPWAVAT AAVLLFGLAT SVAGYGSVAQ SVSKSRFGNA
ETQADEVAKY ASKLDSDYKA QEGRNAAAKE RGEKLVKALD SRANWLELYK AIDESLPRDE
SAEQLDETRI ELMNRISLKS VTSKKYDDLA TWYNDNAQLA KVSPQYFSAF DKAEARKTGP
TGPGYVFTLH GVHFHHAPED PVKGQGTGYV VNTLLKNLQS FKVTRKDSVT GQVIETPVGQ
LGISYATVKA DPFVLIDYYP MGRPDMASAS SAARGLRPGF QPGFNPGGSG AESSYSPPTP
GGISSPGIPS PGIPGTGTGR VIDTQLPPEQ VNTPRKIHMT NFVVQFVWKP TPEKDRPKED
PALPPVDPAA APQDGQAAPV ATPQTPPAV
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