Gene Plim_0069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0069 
Symbol 
ID9136722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp91167 
End bp92885 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content56% 
IMG OID 
Productanion transporter 
Protein accessionYP_003628121 
Protein GI296120343 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGAAG GGGATGAAAT TGATAGCGGC TGGGCCGGTC GATTGGGTTT ATGGCTGGGC 
CCTCTGCTTG GCTTAGTGGT GCTGGTCGTT CCCGGCCCTG CTGACTTGCC ACATGCCGCC
CAAAGGCTGG CTGCAGTCGT CGTGCTGATG GCTGTCTGGT GGGCCACGCA ATGCGTGCCT
ATGGCTGTGA CCAGTCTGGT GCCGCTGATT GCCTTCCCGC TGCTAGGGAT AGACTCAGCC
AAGAATGTGG CCGGCACCTA TCTGACCGAC AGCTCAATGC TCTATCTGGG TGGCTTCATT
ATTGCCTTGG CGATTGAACG CTGGGGCCTG CATCGCCGGG TGGCCTTGCA TGTCGTCAAA
GCGACGGGGA CCAGCCCGCA TGGGATTGTC TGGGGATTCA TGCTGGCGAC ATTCCTCATT
TCGATGTGGA TCAGCAATAC CGCCACCACA CTGATGATGC TGCCGATTGC GATGGCTTTG
ATGACTTCGC TCGAAGAATT GCTGTGTACT TTCGATGAGA AAGAGCCAGA TTTTCTGACA
ACTCAGGCAC TGGGAAGACT CTCTTGCCAG ACCTATCTGG GTGTGGCTTA TGCAGCCAGC
ATTGGCGGGG TGGCCACACT CGTGGGAACC CCCACGAACA TGGCGTTTGT GGGGATCTGG
GAGAAACAGT TTCCCCAGGC ACCTCCGATT TCTGCCGGTC AGTGGATGGC GACCTGGTTG
CCCTTTGGAT TGGTTTTCCT GGGTCTGGCC TGGTTTGTGC TGACTCGAAA GCTAACGACA
CCCGCCGGGT TTTCTCGTTT GAATCGAGAT TTTTTTCGCG AGAGGCTGCA TGATCTGGGG
CCGATGAGCC GCCCCGAATG GCGTGTTCTC ATCGTCTTCT CGCTGACAGC GATCCTCTGG
CTAACAAGAA CTGATCTTCC TCTTTCGTCT AACCTGATCA TTCCCGGCTG GGGAGGACAG
GCCGAAGCTT TTCTCAGCTG GCTGACCGCT GACGCTAAGC CAGCCAGTTC TCACAAAGAC
TGGATCAATG ATTCCACTGT GGGTCTACTT TTTGCGGTAC TGCTGTTTGT CGTCCCGGCG
GGTGAGCAGG ATGTGAAGCG AGGTTCGCCA CGTCTGATGG ACTGGCCCAC AGCCAATCGA
TTGCCATGGG GCATTCTGCT GTTGTTCGGC GGTGGATTTG CCATTGCCGA AGGCTTTCGG
ATTACTGGTC TTTCCCGCTG GAGTGGCGAC CTGTTTGCCT ACTTTTTCAT TGGCCAGTCA
CCGGTTGTTA CTGTGTTGGG TATCTGTGCG CTGATGATCT TCCTCACGGA ATTCACCAGC
AATGTGGCTA CGGTGAATGC TGTTTTGCCG GTCTTTGCTG GAGCTGCGAT TGCTTTGGGA
CTCGATCCGA GGCTGGTCAT GATCCCTGCC ACGATTGCCA CAAGCTGCGG CTTCATGCTG
CCAGCCGGGA CTCCGCCCAA TGCGATCGCT TTTGGAACCG GGCGGATTCC GATTGGTCAG
ATGCTCAAAT ATGGCCTCTG GTTGAATCTC ATGGGGATTG TTTTGTGTAC AGCAGCCACC
TGGGTGCTGC TGATCCCGCA AATGGGAATT CGCCTCGGAG AAGTTCCCGC CTGGGCCGTC
CCCATAGAGA AAGCCTCTTC ACCAATTGAA CCCGTTGCGC CCACATTGTC GAATGCTCCG
AAATCCAAAC TCAGCCCGGC AGACGAGGGG AAAAAATAA
 
Protein sequence
MAEGDEIDSG WAGRLGLWLG PLLGLVVLVV PGPADLPHAA QRLAAVVVLM AVWWATQCVP 
MAVTSLVPLI AFPLLGIDSA KNVAGTYLTD SSMLYLGGFI IALAIERWGL HRRVALHVVK
ATGTSPHGIV WGFMLATFLI SMWISNTATT LMMLPIAMAL MTSLEELLCT FDEKEPDFLT
TQALGRLSCQ TYLGVAYAAS IGGVATLVGT PTNMAFVGIW EKQFPQAPPI SAGQWMATWL
PFGLVFLGLA WFVLTRKLTT PAGFSRLNRD FFRERLHDLG PMSRPEWRVL IVFSLTAILW
LTRTDLPLSS NLIIPGWGGQ AEAFLSWLTA DAKPASSHKD WINDSTVGLL FAVLLFVVPA
GEQDVKRGSP RLMDWPTANR LPWGILLLFG GGFAIAEGFR ITGLSRWSGD LFAYFFIGQS
PVVTVLGICA LMIFLTEFTS NVATVNAVLP VFAGAAIALG LDPRLVMIPA TIATSCGFML
PAGTPPNAIA FGTGRIPIGQ MLKYGLWLNL MGIVLCTAAT WVLLIPQMGI RLGEVPAWAV
PIEKASSPIE PVAPTLSNAP KSKLSPADEG KK