Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0067 |
Symbol | |
ID | 9136720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | - |
Start bp | 86633 |
End bp | 88777 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_003628119 |
Protein GI | 296120341 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGAAC TAGAATCCTC CGAGAACCAG CCCACTCAGT CTTCAACGAC GCCAGCGCCA GTGAAGTCAG AGATCGTGAA ATCAGAACCC GTAAAGCCGG ATCCTGTGAA GACCGAGCCA GCGAAACCTC TTGGCACAAA GCGAAAAGCT GAAAAACCAG GCTCTTCCAA CCTGGTCTGG TATCTGCTGA TCGCCATTGT CATTTCGATT GGTGTCTTCA CACTGGGTGG CAGTGGTAAA CGCACCACCG TCGAATTCAG CGACTTCAAA CAGCGATTGA AACAAGGCTC GTTGACTGCC ACGAATGTCT TCGAAGTGGA AATTGGGCCG ACATCGATTC GCTATCAGGA TCAGCCCGGC AACAAAGGTC GTGAAGCGAC CTCGTCGAAG CGGGTGACTC CGGCTTACTT TGTGGTGCCG GTCGTTGGGA TGCGAGATGG TGCCCAGACC AGCATTATTG AATTGCTGGA TAAAAACGGC ATCAACTACG GCTTCAGTGC CGAGCCCCCC GAATGGCAGA TGATGCTCTA TTATCTGGGA GTTCCCCTGA TTCTGCTGGC AGTCTTTTTG TATGTCTTCC GGAAAATGGC AGGCCCCGGG GCTGCGATGT CCTTTGGCCG GAGCCGGGGT AAGCTTTACG CTCAGGAAGA GATTGGAGTC ACCTTTCAGG ATGTGGCAGG GATCGATGAA GCCGTTGAAG AACTGCGTGA AGTCGTCGAG TTTCTGAAGA CACCCGAGAA GTACCAGGCT CTGGGTGGCC GCATTCCTCG CGGAGTTCTG CTCGTTGGGC CGCCGGGGAC GGGTAAAACC TTGCTGGCAA AAGCCGTAGC GGGTGAAGCA GGTGTTCCAT TTTACGGATT GTCAGGTTCT GACTTTGTCG AAATGTTTGT CGGTGTGGGA GCCGCCCGAG TTCGCGACAT GTTCCAGCAG GCTGGTGAAA GATCGCCAGC GATTATCTTT ATCGATGAAC TGGATGCGCT CGGCAAAGTT CGCGGAAGTG GCATGCCCGG CGGACACGAC GAGCGCGAGC AGACACTGAA TGCACTGCTG GTTGAGATGG ATGGTTTTTC CTCCGATCAG AGTGTGATCG TCATGGGTGC CACCAATCGA CCAGAAACGC TGGACCCCGC CTTAATGCGA CCTGGTCGAT TTGACCGCCA TGTGCTGGTG GATCGGCCCG ATGTCAAAGG GCGTGAAGCG ATACTTAAAG TGCATGCCAG CAAGGTCAAA GTTGACGATC ACGTCAACCT GAAATACCTG GCACGACTAA CTCCTGGTTT TGTTGGTGCC GACCTGGCGA ACCTGGTCAA TGAAGCCGCA CTTCTGGCGG CACGCGCCAA TAAACCCAAA GTGACCAATA TTGAGTTTGA AGAGGCTGTC GAGCGGATTG TGGCGGGGTT GGAAAAATCG ACCCGGATCA TGCCCGAGGA AGAGAAGAAT CGCGTGGCGT GGCATGAAAT CGGCCATGCA CTGGTTGCCT GTTCGCTGCC GCATGTTGAT CCCGTCCATA AAGTCTCGAT CATTCCCCGT GGTCTGGGAG CTCTGGGGTA CACACTCCAA AGGCCGGAAG AAGACCGCCA GTTGATTACC AAGACCGAAC TTCAGAACCG GATCTGTGTA TTACTGGGTG GTATTGCTGC TGAAGACATC GTATTCAACG AGAACTCCAC AGGGGGTTCC AATGATCTGC AGCGGGCGAC TGATCTTGCC CGCCGCATGG TGACTGAGTT TGGCATGAGC CCCAAACTGG GACGCGTGCA TTACAGCGAT ACATCCCGCT CGGCTTTTCT CGCGAATGCC GCCACTGTTT CTGAGAGTGC TCACAGTGAA GAAACCATTC GGGAGATCGA TCTCGAAGTC AGGCGCATCA TCGATGCGGC CTATGAGACA GCTCACGAGA TTCTCGTGAC TCGTCGGGCA GCGATGGATC ACCTCACGAG AGAGCTGCTG GAGATCGAGG TGATGGATGC AGAAAAACTG CAGCAGATCC TTTCTCAATA CCAGACCGGG CCACAGATTA TGCCGGGAAC GTCTGCACAG ATTTCGCCGA ACCCGACATC TTTGCCCACT CCTGCGGTTG CCCCTTATCG ACCGGGCGAG AGCGATGGCA GCAGCGAAGG TGGAAACCCA GTGAATGTCG GCTGA
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Protein sequence | MTELESSENQ PTQSSTTPAP VKSEIVKSEP VKPDPVKTEP AKPLGTKRKA EKPGSSNLVW YLLIAIVISI GVFTLGGSGK RTTVEFSDFK QRLKQGSLTA TNVFEVEIGP TSIRYQDQPG NKGREATSSK RVTPAYFVVP VVGMRDGAQT SIIELLDKNG INYGFSAEPP EWQMMLYYLG VPLILLAVFL YVFRKMAGPG AAMSFGRSRG KLYAQEEIGV TFQDVAGIDE AVEELREVVE FLKTPEKYQA LGGRIPRGVL LVGPPGTGKT LLAKAVAGEA GVPFYGLSGS DFVEMFVGVG AARVRDMFQQ AGERSPAIIF IDELDALGKV RGSGMPGGHD EREQTLNALL VEMDGFSSDQ SVIVMGATNR PETLDPALMR PGRFDRHVLV DRPDVKGREA ILKVHASKVK VDDHVNLKYL ARLTPGFVGA DLANLVNEAA LLAARANKPK VTNIEFEEAV ERIVAGLEKS TRIMPEEEKN RVAWHEIGHA LVACSLPHVD PVHKVSIIPR GLGALGYTLQ RPEEDRQLIT KTELQNRICV LLGGIAAEDI VFNENSTGGS NDLQRATDLA RRMVTEFGMS PKLGRVHYSD TSRSAFLANA ATVSESAHSE ETIREIDLEV RRIIDAAYET AHEILVTRRA AMDHLTRELL EIEVMDAEKL QQILSQYQTG PQIMPGTSAQ ISPNPTSLPT PAVAPYRPGE SDGSSEGGNP VNVG
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