Gene Plim_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0061 
Symbol 
ID9136714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp77932 
End bp78786 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content60% 
IMG OID 
Product1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase 
Protein accessionYP_003628113 
Protein GI296120335 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.953155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAATT CGCCTCGGAA TCCATCCGCA GATTCTGATC CATTAGAAGT ATCTGTTCAT 
CAAAGCCAGT CGTCGCTTCT TCCCCAGGAA AAAAGTCTGT GGGAGCTGTT ATCCACGTGG
CGAAATGGTG ACTTGAGTGA TGATGATCTC AAAGCGCAAT TGCCACTCCT CGATGCCTGG
CGATTACATA CCGGCGGTGA ACTGAGGCTC GATCTGGGCC GATATTCGCG CTGCGGTGTT
CCCGAGGTGA TCTATGGGCC AGGCAAGCGG CCTGATCAGA TCGTCGAAGC TTTTGAGCTT
TTGGCCAGAT CCCAGCAGCC GGCATTGGCG ACTCGATTGA CGCCGGATCA GGCCGAAGCA
TTGCTGATGG CATTTCCTGC GGCGACTGTC AACAGCCTGG CCCGCACGGT TTCACTGGGA
AGCCTGCCAC GGCATGAGCG AACCGTCTGT GTGGTCACTG CCGGGACGAG CGACCGCCCG
GTCGCGGAAG AAGCTGCTGA AACGGCTCGC TGGCTCGGGG CGCCGGTGGA GTTAATCTGC
GATGTGGGAG TCGCAGGACC GCAGCGATTG CTGGCGGAAT TGCCCCGCTT GCGACAGGCT
GCTGTGGTGG TGGTGGTCGC TGGGATGGAG GCCGCTTTGC CTTCGGCAGT GGCTGGCTGG
GTGGCAGTCC CTGTGATTGC TGTCCCGACG AGTGTCGGCT ACGGAGCCAA TTTTGGAGGT
CTGGCAGCCG TGCTCTCGAT GCTCAACAGT TGTGCTGCCA ACGTCACCGT GGTCAATATC
GACGCCGGGT TCAAGGGAGG GTACGTGGCC GGCTTGATTG CCCGGCCGCA TGAACCCATG
AGGGCAGGAA ACTGA
 
Protein sequence
MHNSPRNPSA DSDPLEVSVH QSQSSLLPQE KSLWELLSTW RNGDLSDDDL KAQLPLLDAW 
RLHTGGELRL DLGRYSRCGV PEVIYGPGKR PDQIVEAFEL LARSQQPALA TRLTPDQAEA
LLMAFPAATV NSLARTVSLG SLPRHERTVC VVTAGTSDRP VAEEAAETAR WLGAPVELIC
DVGVAGPQRL LAELPRLRQA AVVVVVAGME AALPSAVAGW VAVPVIAVPT SVGYGANFGG
LAAVLSMLNS CAANVTVVNI DAGFKGGYVA GLIARPHEPM RAGN