| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_0048 |
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| Symbol | |
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| ID | 9136701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | + |
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| Start bp | 64239 |
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| End bp | 66605 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | integral membrane protein |
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| Protein accession | YP_003628100 |
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| Protein GI | 296120322 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCCGACA GCGATTCATC CGGACAATCA CCAGCCCCAT CACAGACGAC CCATCAGGGG
CCGGTGATTC TGCCCAATCC CTGGCGCGAC TGGGTCATTG ACGGATTGAT CAAATACCGC
GTCTGGTGGC TGTTACTGGC CTGCCTGATG ACGGCTATTT CCATCTGGCC TGCCGGCCAG
TTGAAGTTTG ACGAGTCGAT CGAATCGATG TACGCGCCGG GCAATCCTCA TCTCAGGGAT
TATCTCGAAA GCAAAAAGTG GTTTGGTGGT GACGAGTTTA TCTTCATTGC CTATCACGAT
CCCGAACTCT TTGAAGAAGC TGGTGAAAAC CGCCTGTCAC AACTGGCCGA CGAAGTGAGT
GCCGTACCCG GTGTGATCCC CACCAGCGTG CAGTGTCTGG CCACTTACTT GCGCATGACC
CGGCACCCCG CTTTTCGCTC GCGCCGAGAG GAGTTGCTCG ATTTTTCGCG GGGTGTCCTT
CTCGGGAGTG ATAATCAGAC AACCTGCATT GCTGTCCGCC TGCAAGAAAG TGAACGGGCC
GTTGATTCCG CTGGTCAACC CATCTCGCGT GGTCAGACGA TTGCCAAACT ACGGGCTTTG
GCCGAGAAGC AGTCCTTTCC CACGTTCGTG ATTGGCGAGC CGATTCTCGT TCACGATATG
TTCCGCTATG CCCAGGAAGA TGGCGAGTTC ATGGGCTGGG CCGCTTCGGC TCTCTTGATT
GGCGTGGTGC TTTTCTTTCT GCGCGATCTT CGTTCGGTCA TTCTGCCGTT TGTCATTGTG
CAGATGACGA TTCTTTGGAC GAAAGCCGGC CTGTGGGCCT CCCATCTGGA ACTGACCATG
GTCAGTTCTG TCCTCGGTTC ACTGCTGACG ATTATTGGTG TCTCTACTGT CGTTTATATG
TCGCTCTATT ATCACGAATT GCGACAGTCG CTGGATCGAG AAACTGCCTT CCGTCGCATG
CTGCAGGTTA TTGGCATCGA TATCATTTTC GTCTGCCTAA CCACTGCAGC CGGCTTTGCG
GCTCAGCTTT CGAGCCACCT GCATCCCGTG CAGTCGTTTG GCATCACCAT GGTCCTTGGG
TCACTGCTGG TGCTGGTCGC AATGACACTT GTCCTTCCCG GAGGGATGTT ACTCGGCCCG
GATCGAGCCG GTGCTCAAAA GCCACGCGGC GATCAGCAGG TCAGTCAGTG GCTCGCTTCA
CTCACCCAGT TCGTGCTGGC GCACCGCTTC TGGATGGGGA TCGTTACTCT GGCGGCTGTG
ATCTATGGGA TGGCGGGCCT GATGCAATTG CAGGTGGAAA CCGATTTCAC CAAGAACTTC
CGCTCGTCCA GCCCTGTGGT GAAATCACTC GATTTTCTCG AAACCCGCCT CGGGGGAGCT
GGCCTTTGGG AAGTTAATTT TCCGGCTCCC CATCGACTGA CCGACGAACA TCTCGATAAA
GTCCGGCAGC TGGCCGAAAA TCTGCGTGGC TTGATCGGCA CAGCCGAAGG TCAAGGTCTG
ACGAAAGTCG TCGCGATGAC CGATGGGCTT GATCTTGTCC CTTTGCTCCC GTTTTTAATC
CCTGATGCAC AGGCCCAATC ACGCTGGCTG AACTCTCTCC AGCCTGAATT TGTTCCCAGT
CTTTACAATG CCGAACAAGG CCGGATGCGC ATCATGCTCC GCGGGCTGGA GAGACAATCG
GCCCGAGAAA AACAGGCACT GATTGATCGC GTCGAAACAC TCGCCAAAGA ACAGTTCCCT
GATGCCAAAG TGACCGGACT CTTTGTTCTC CTGAATTACC TGATCGACAG CCTGCTGCAG
GATCAACGCA CCGATCTCAT GGTGGGAGCA CTCGGCCTGA TTGCCATTAT GTCTATTGCC
TATCGCTCGA TTGTCATGGG CTTTGTCTCG CTTGTACCCA ATGTTCTGCC CATCATGCTC
CTTCTGGGAA CCATGGGCTG GCTCGGGCTA CGCGTGAATA TTGGTACCGC CATGATTTCC
AGCGATACCA TGGGGCTCAC CATTCACGAC AGCATTTTCT ATATGTCGGC CTACTTGCGG
GCCAGACGAT CAGGCCTCAA TTTTCAGGGG GCCTTAGGAG AAGTACAGAC CGAAGTCCGC
AAGCCGCTCA TCTATTCGAA TGTGGCCTTA ATCCTCGGGT TTTTAGTGCT GACAACCAGT
CACTTTGTCC CGTTGATCAC CTTTGGAGTT CTGGTCAGTA CGGCCATCGC TGGTGGATTG
TTGGTGAATC TGCTCCTCTT GCCTCCACTC CTGCAACTGG TGGATCGACC CTGGCTGGGC
CTGGCACCAG ACTCTGCCCG GACTGCTGGC CCTGAAGAAA CCGCTGGCAC TGAGCAGAAT
CCTGTCGAGC CAACATCTTC AGTTTGA
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| Protein sequence | MSDSDSSGQS PAPSQTTHQG PVILPNPWRD WVIDGLIKYR VWWLLLACLM TAISIWPAGQ
LKFDESIESM YAPGNPHLRD YLESKKWFGG DEFIFIAYHD PELFEEAGEN RLSQLADEVS
AVPGVIPTSV QCLATYLRMT RHPAFRSRRE ELLDFSRGVL LGSDNQTTCI AVRLQESERA
VDSAGQPISR GQTIAKLRAL AEKQSFPTFV IGEPILVHDM FRYAQEDGEF MGWAASALLI
GVVLFFLRDL RSVILPFVIV QMTILWTKAG LWASHLELTM VSSVLGSLLT IIGVSTVVYM
SLYYHELRQS LDRETAFRRM LQVIGIDIIF VCLTTAAGFA AQLSSHLHPV QSFGITMVLG
SLLVLVAMTL VLPGGMLLGP DRAGAQKPRG DQQVSQWLAS LTQFVLAHRF WMGIVTLAAV
IYGMAGLMQL QVETDFTKNF RSSSPVVKSL DFLETRLGGA GLWEVNFPAP HRLTDEHLDK
VRQLAENLRG LIGTAEGQGL TKVVAMTDGL DLVPLLPFLI PDAQAQSRWL NSLQPEFVPS
LYNAEQGRMR IMLRGLERQS AREKQALIDR VETLAKEQFP DAKVTGLFVL LNYLIDSLLQ
DQRTDLMVGA LGLIAIMSIA YRSIVMGFVS LVPNVLPIML LLGTMGWLGL RVNIGTAMIS
SDTMGLTIHD SIFYMSAYLR ARRSGLNFQG ALGEVQTEVR KPLIYSNVAL ILGFLVLTTS
HFVPLITFGV LVSTAIAGGL LVNLLLLPPL LQLVDRPWLG LAPDSARTAG PEETAGTEQN
PVEPTSSV
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