Gene Plim_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0042 
Symbol 
ID9136695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand
Start bp55775 
End bp56941 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003628094 
Protein GI296120316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.282786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCT GCGAAGTATC GAGGCATTGG GGTTCTCTTC TGGATTGGAA AACCATTGGC 
TTCTGCCTGT CGGGACTGCT GCTGCTGGGC ACACTGGAAC CAGCTGCGGC CCAGTCGAAA
TCTTCCAGAA CCAGTGCTTT ACAACCGAAT ACCACGAAGA GTGCTGCCGT TCGAGTTGCC
CCGCCTTACA ACGACAAAAC ACCGAAGCGC TACGACCTCA CCGCCCGGGC GAGTGAGATC
GATCCCAGAG CCAAAGAGCA TCCTGAGATT GGTTTTGTTT TTAACAAAGA CGGCAAGCCG
CAGGATGTGC AGCATGCCGT CGTCGATACG CGCGTCAAAC CGCGAGGCAA GCTAGTGATC
TGGCTGATGG GCCACAATCA AGGGCTGTTC GAGCGGATCT CTGGCTATGG AATGCATGGC
ATTCAGGTGC ATTATGCGAA TGGCTGGTTT GGCAAGCTCA ACAAAGAACC ACCACCCGAT
GAACTCTACC TGGGGCGAAT TCGCCTTGAA GCAGCGACGG GCGAAGACTT CAGTCCCGAC
ATTGAGATCC CGCTTCCGGA CGGCATGGCC GAACGTTCGC GTCAGTTTGT GAAGTGGCTG
GCCAAAGAAA ATCCTCAGGG GAAATGGGAG CAATTCCTGA CCGAAGAGGG TGATCTCCGC
TGGGAAGATG TCATCATGAG TGGGATTTCG CACGGTTCGA CGACAGCCGC CCGGTTTGCT
GTCCATCAGA AGGTGGATCG CGTGGTGATG TTTTCCGGGC CGCGCGATCA ATTGGAAGGT
TGGTACAAGC TTCCTTCAGC CACGCCGCAT GAGCGGTTTT TTGGCTTTAC GCATGTGCTG
GATGGTGGCT GGACTGCAGA CCATTACTGC CGGTCATGGC TGTTACTGGG GCTCAATGAC
TTTGGCCCGA CTGTGAATGT GGATGACGCC AAACCCCCAT TCAGCAATAC CCGTCGTCTG
GTCACGAATG CCAATGTGGG GAACGATGCC AACAATGCTC ACGGTGCTTC GGTTCCGGGC
GGGCCGTCTC CCAAAAATTC GAAGGGTGTC TACCTTTATG AGGATGTCTG GAAATACCTG
TTCACGCATC CGGTCGATCG GAAGGGCCCG GCAGTCCCTG CAGAAGCCGA TTGCACACTC
GAACATAAAG TCAAAGGGAA GAAGTAA
 
Protein sequence
MKICEVSRHW GSLLDWKTIG FCLSGLLLLG TLEPAAAQSK SSRTSALQPN TTKSAAVRVA 
PPYNDKTPKR YDLTARASEI DPRAKEHPEI GFVFNKDGKP QDVQHAVVDT RVKPRGKLVI
WLMGHNQGLF ERISGYGMHG IQVHYANGWF GKLNKEPPPD ELYLGRIRLE AATGEDFSPD
IEIPLPDGMA ERSRQFVKWL AKENPQGKWE QFLTEEGDLR WEDVIMSGIS HGSTTAARFA
VHQKVDRVVM FSGPRDQLEG WYKLPSATPH ERFFGFTHVL DGGWTADHYC RSWLLLGLND
FGPTVNVDDA KPPFSNTRRL VTNANVGNDA NNAHGASVPG GPSPKNSKGV YLYEDVWKYL
FTHPVDRKGP AVPAEADCTL EHKVKGKK