Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plim_0042 |
Symbol | |
ID | 9136695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Planctomyces limnophilus DSM 3776 |
Kingdom | Bacteria |
Replicon accession | NC_014148 |
Strand | + |
Start bp | 55775 |
End bp | 56941 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003628094 |
Protein GI | 296120316 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.282786 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGATCT GCGAAGTATC GAGGCATTGG GGTTCTCTTC TGGATTGGAA AACCATTGGC TTCTGCCTGT CGGGACTGCT GCTGCTGGGC ACACTGGAAC CAGCTGCGGC CCAGTCGAAA TCTTCCAGAA CCAGTGCTTT ACAACCGAAT ACCACGAAGA GTGCTGCCGT TCGAGTTGCC CCGCCTTACA ACGACAAAAC ACCGAAGCGC TACGACCTCA CCGCCCGGGC GAGTGAGATC GATCCCAGAG CCAAAGAGCA TCCTGAGATT GGTTTTGTTT TTAACAAAGA CGGCAAGCCG CAGGATGTGC AGCATGCCGT CGTCGATACG CGCGTCAAAC CGCGAGGCAA GCTAGTGATC TGGCTGATGG GCCACAATCA AGGGCTGTTC GAGCGGATCT CTGGCTATGG AATGCATGGC ATTCAGGTGC ATTATGCGAA TGGCTGGTTT GGCAAGCTCA ACAAAGAACC ACCACCCGAT GAACTCTACC TGGGGCGAAT TCGCCTTGAA GCAGCGACGG GCGAAGACTT CAGTCCCGAC ATTGAGATCC CGCTTCCGGA CGGCATGGCC GAACGTTCGC GTCAGTTTGT GAAGTGGCTG GCCAAAGAAA ATCCTCAGGG GAAATGGGAG CAATTCCTGA CCGAAGAGGG TGATCTCCGC TGGGAAGATG TCATCATGAG TGGGATTTCG CACGGTTCGA CGACAGCCGC CCGGTTTGCT GTCCATCAGA AGGTGGATCG CGTGGTGATG TTTTCCGGGC CGCGCGATCA ATTGGAAGGT TGGTACAAGC TTCCTTCAGC CACGCCGCAT GAGCGGTTTT TTGGCTTTAC GCATGTGCTG GATGGTGGCT GGACTGCAGA CCATTACTGC CGGTCATGGC TGTTACTGGG GCTCAATGAC TTTGGCCCGA CTGTGAATGT GGATGACGCC AAACCCCCAT TCAGCAATAC CCGTCGTCTG GTCACGAATG CCAATGTGGG GAACGATGCC AACAATGCTC ACGGTGCTTC GGTTCCGGGC GGGCCGTCTC CCAAAAATTC GAAGGGTGTC TACCTTTATG AGGATGTCTG GAAATACCTG TTCACGCATC CGGTCGATCG GAAGGGCCCG GCAGTCCCTG CAGAAGCCGA TTGCACACTC GAACATAAAG TCAAAGGGAA GAAGTAA
|
Protein sequence | MKICEVSRHW GSLLDWKTIG FCLSGLLLLG TLEPAAAQSK SSRTSALQPN TTKSAAVRVA PPYNDKTPKR YDLTARASEI DPRAKEHPEI GFVFNKDGKP QDVQHAVVDT RVKPRGKLVI WLMGHNQGLF ERISGYGMHG IQVHYANGWF GKLNKEPPPD ELYLGRIRLE AATGEDFSPD IEIPLPDGMA ERSRQFVKWL AKENPQGKWE QFLTEEGDLR WEDVIMSGIS HGSTTAARFA VHQKVDRVVM FSGPRDQLEG WYKLPSATPH ERFFGFTHVL DGGWTADHYC RSWLLLGLND FGPTVNVDDA KPPFSNTRRL VTNANVGNDA NNAHGASVPG GPSPKNSKGV YLYEDVWKYL FTHPVDRKGP AVPAEADCTL EHKVKGKK
|
| |