Gene Plim_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlim_0030 
Symbol 
ID9136683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePlanctomyces limnophilus DSM 3776 
KingdomBacteria 
Replicon accessionNC_014148 
Strand+ 
Start bp42475 
End bp43188 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content54% 
IMG OID 
Productprotein of unknown function DUF164 
Protein accessionYP_003628082 
Protein GI296120304 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.372123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCGT CAGGCATGCA GCTTAAGGGA CTTCACACGA TTCATCTGGC ATTGCGTGAT 
GTGCAGGCCT TGATTGACCG TGGCCCGAAG CAGACTCTCG CCAAGAAACA GTTGATTCAG 
AAGCGGCAAG CCGATCATGA AGCTGCCAGA GATCGCCTGA AGCAAGCCCG TTTGCTGGCT 
GATCAGAAGA ATCTGCAGCT CAAGACCCAG GAAGCCCGGA TTGCCGAATA TCGGGCCAAG 
CAGAATACGG CGGCTTCAAA CCGCGAGTAC GACATTATCA AGGGGCAGAT CGCTGCTGAT 
GAGATGTCCA AAAGTGTGCT TGAAGATGAA ATTTTCGAAA CGCTTGAGCA GATCGATAAA 
TGTCAGCTTG AAATTGCTGA GCGTGAGAAA GAAGTCGCTG CTGCTCAGGC CGAACTGGTG 
CGGTATGAAG CCGAGTACGC CGCTGAGAAA CCTGGCCTCG AAGCGAGAAA AGCGACACTG 
GTTCAGCAAC TGGCCAGTGC TGAAGGTTGC CTGCCGGCGA ATATTATCCC GGATTACCGA 
CGACAGATTC AGGCCCATGG TGCGGATGCT TTGGCACCCG TTGAGAATCG TTCCTGCAGT 
GCCTGCTATC TGCAGCTGAC ACAGCAGCTC TTCATGGAAC TGCGTGCAGG GAAGCCCATG 
TTCTGCCGCT CCTGCGGACG ACTCATTTAT CTCGATGCTG AGGCAGACGA GTAA
 
Protein sequence
MDSSGMQLKG LHTIHLALRD VQALIDRGPK QTLAKKQLIQ KRQADHEAAR DRLKQARLLA 
DQKNLQLKTQ EARIAEYRAK QNTAASNREY DIIKGQIAAD EMSKSVLEDE IFETLEQIDK 
CQLEIAEREK EVAAAQAELV RYEAEYAAEK PGLEARKATL VQQLASAEGC LPANIIPDYR 
RQIQAHGADA LAPVENRSCS ACYLQLTQQL FMELRAGKPM FCRSCGRLIY LDAEADE